Difference between revisions of "TSS:Hg 103215.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|LCN5= | |LCN5= | ||
| − | |all_trans=BC042109:15 NM_178469:24 AK126902:24 BC130465:69 BC132714:69 | + | |all_trans=BC042109:15 NM_178469:24 AK126902:24 ENST00000371688.8:60 BC130465:69 BC132714:69 ENST00000612714.1:-234 NM_001345934:-234 AY301268:-234 HQ258567:371 KJ895524:371 GQ891310:373 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 10: | Line 10: | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17{{!}}LCN5 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
|gene_id=138307 | |gene_id=138307 | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 136758305 |
|---|---|
| End of the center position in the TSS region: | 136758306 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC042109 |
|---|---|
| Distance: | 15 |
| Num_trans: | 12 |
| All_trans: | BC042109:15 NM_178469:24 AK126902:24 ENST00000371688.8:60 BC130465:69 BC132714:69 ENST00000612714.1:-234 NM_001345934:-234 AY301268:-234 HQ258567:371 KJ895524:371 GQ891310:373 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17|LCN5 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
