Difference between revisions of "TSS:Hg 103236.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC009429:-478 AF258569:-487 AF217998:-487 BC000850:497 | + | |all_trans=LF346332:387 MA581909:387 BC009429:-478 AF258569:-487 AF217998:-487 BC000850:497 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| − | |distance= | + | |distance=387 |
| − | |distance_to_tss= | + | |distance_to_tss=2665 |
|end=136942080 | |end=136942080 | ||
|end_of_center_position=136942074 | |end_of_center_position=136942074 | ||
| Line 12: | Line 12: | ||
|gene_description=F-box and WD repeat domain containing 5 | |gene_description=F-box and WD repeat domain containing 5 | ||
|gene_id=54461 | |gene_id=54461 | ||
| − | |gene_name= | + | |gene_name=FBXW5 |
|gene_source=HGNC:13613 | |gene_source=HGNC:13613 | ||
|gene_symbol=FBXW5 | |gene_symbol=FBXW5 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=136942066 | |start=136942066 | ||
|start_of_center_position=136942073 | |start_of_center_position=136942073 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF346332 MA581909 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103236.1 | |tss_id=hg_103236.1 | ||
Latest revision as of 17:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136942073 |
|---|---|
| End of the center position in the TSS region: | 136942074 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF346332 MA581909 |
|---|---|
| Distance: | 387 |
| Num_trans: | 6 |
| All_trans: | LF346332:387 MA581909:387 BC009429:-478 AF258569:-487 AF217998:-487 BC000850:497 |
TATA-Box annotation
| Distance to TSS: | 2665 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | FBXW5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
