Difference between revisions of "TSS:Hg 103238.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC009429:-224 AF258569:-233 AF217998:-233 ENST00000487794.5 | + | |all_trans=BC009429:-224 AF258569:-233 AF217998:-233 ENST00000487794.5:-334 AL137631:-334 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=-224 | |distance=-224 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2421 |
|end=136942334 | |end=136942334 | ||
|end_of_center_position=136942317 | |end_of_center_position=136942317 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=136942299 | |start=136942299 | ||
Revision as of 17:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136942316 |
|---|---|
| End of the center position in the TSS region: | 136942317 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC009429 |
|---|---|
| Distance: | -224 |
| Num_trans: | 5 |
| All_trans: | BC009429:-224 AF258569:-233 AF217998:-233 ENST00000487794.5:-334 AL137631:-334 |
TATA-Box annotation
| Distance to TSS: | 2421 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
