Difference between revisions of "TSS:Hg 103243.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000459905.5 | + | |all_trans=ENST00000459905.5:1 BC031100:1 ENST00000483559.5:9 BC035355:9 ENST00000428398.5:10 LF346330:15 MA581907:15 ENST00000325285.8:-24 NM_018998:-24 BC014130:47 LF205587:-56 MA441164:-56 AK315738:68 BC014297:76 ENST00000491246.4:77 AK026081:79 ENST00000443788.1:163 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
|distance=1 | |distance=1 | ||
| − | |distance_to_tss= | + | |distance_to_tss=33 |
|end=136944714 | |end=136944714 | ||
|end_of_center_position=136944706 | |end_of_center_position=136944706 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=136944696 | |start=136944696 | ||
|start_of_center_position=136944705 | |start_of_center_position=136944705 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000459905.5 | + | |transcript_name=ENST00000459905.5 BC031100 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103243.1 | |tss_id=hg_103243.1 | ||
Revision as of 17:22, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 136944705 |
|---|---|
| End of the center position in the TSS region: | 136944706 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000459905.5 BC031100 |
|---|---|
| Distance: | 1 |
| Num_trans: | 17 |
| All_trans: | ENST00000459905.5:1 BC031100:1 ENST00000483559.5:9 BC035355:9 ENST00000428398.5:10 LF346330:15 MA581907:15 ENST00000325285.8:-24 NM_018998:-24 BC014130:47 LF205587:-56 MA441164:-56 AK315738:68 BC014297:76 ENST00000491246.4:77 AK026081:79 ENST00000443788.1:163 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
