Difference between revisions of "TSS:Hg 103244.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_018998:- | + | |all_trans=ENST00000325285.8:0 NM_018998:0 LF205587:-18 MA441164:-18 ENST00000459905.5:31 BC031100:31 ENST00000483559.5:39 BC035355:39 ENST00000428398.5:40 LF346330:45 MA581907:45 BC014130:77 AK315738:98 BC014297:106 ENST00000491246.4:107 AK026081:109 ENST00000443788.1:193 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=136944752 | |end=136944752 | ||
|end_of_center_position=136944740 | |end_of_center_position=136944740 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_018998 | |nearest_refseq=NM_018998 | ||
|nearest_unigene=Hs.522507 | |nearest_unigene=Hs.522507 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=136944726 | |start=136944726 | ||
|start_of_center_position=136944739 | |start_of_center_position=136944739 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_018998 | + | |transcript_name=ENST00000325285.8 NM_018998 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103244.1 | |tss_id=hg_103244.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q969U6 | + | |uniprot_id=A0A024R8H7 Q969U6 |
}} | }} | ||
Revision as of 17:22, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136944739 |
|---|---|
| End of the center position in the TSS region: | 136944740 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000325285.8 NM_018998 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000325285.8:0 NM_018998:0 LF205587:-18 MA441164:-18 ENST00000459905.5:31 BC031100:31 ENST00000483559.5:39 BC035355:39 ENST00000428398.5:40 LF346330:45 MA581907:45 BC014130:77 AK315738:98 BC014297:106 ENST00000491246.4:107 AK026081:109 ENST00000443788.1:193 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_018998 |
| Entrez ID: | 54461 |
| Nearest Unigene: | Hs.522507 |
| Nearest Refseq: | NM_018998 |
| Nearest Ensembl: | ENSG00000159069 |
| Gene Name: | F-box and WD repeat domain containing 5 |
| Gene Alias: | Fbw5 |
| Gene Description: | F-box and WD repeat domain containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
