Difference between revisions of "TSS:Hg 103282.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000341511. | + | |all_trans=ENST00000341511.11:0 NM_001606:0 AF178941:30 ENST00000494046.5:36 AK308738:36 ENST00000464876.5:42 BC090860:42 ENST00000265662.9:-43 ENST00000371605.7:-43 BC064542:44 ENST00000492260.5:49 BC029282:49 AF327657:74 AB384556:76 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.2 | |cpg_percent=0.2 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=137028245 | |end=137028245 | ||
|end_of_center_position=137028233 | |end_of_center_position=137028233 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001606 | |nearest_refseq=NM_001606 | ||
|nearest_unigene=Hs.421202 | |nearest_unigene=Hs.421202 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=137028219 | |start=137028219 | ||
|start_of_center_position=137028232 | |start_of_center_position=137028232 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000341511. | + | |transcript_name=ENST00000341511.11 NM_001606 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103282.1 | |tss_id=hg_103282.1 | ||
Revision as of 17:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137028232 |
|---|---|
| End of the center position in the TSS region: | 137028233 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000341511.11 NM_001606 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000341511.11:0 NM_001606:0 AF178941:30 ENST00000494046.5:36 AK308738:36 ENST00000464876.5:42 BC090860:42 ENST00000265662.9:-43 ENST00000371605.7:-43 BC064542:44 ENST00000492260.5:49 BC029282:49 AF327657:74 AB384556:76 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001606 |
| Entrez ID: | 20 |
| Nearest Unigene: | Hs.421202 |
| Nearest Refseq: | NM_001606 |
| Nearest Ensembl: | ENSG00000107331 |
| Gene Name: | ATP binding cassette subfamily A member 2 |
| Gene Alias: | ABC2 |
| Gene Description: | ATP binding cassette subfamily A member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.2 |
| GC%: | 0.865672 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
