Difference between revisions of "TSS:Hg 103286.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000625103 | + | |all_trans=ENST00000625103.1:3 ENST00000476211.5:4 ENST00000398207.8:8 BC172448:9 ENST00000459850.5:-16 ENST00000487109.5:-16 BC144588:-16 BC144589:-16 ENST00000614293.4:-23 NM_212533:-23 ENST00000425423.1:74 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001606 | |nearest_refseq=NM_001606 | ||
|nearest_unigene=Hs.421202 | |nearest_unigene=Hs.421202 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=137028880 | |start=137028880 | ||
|start_of_center_position=137028889 | |start_of_center_position=137028889 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000625103 | + | |transcript_name=ENST00000625103.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103286.1 | |tss_id=hg_103286.1 | ||
Revision as of 17:23, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 137028889 |
|---|---|
| End of the center position in the TSS region: | 137028890 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000625103.1 |
|---|---|
| Distance: | 3 |
| Num_trans: | 11 |
| All_trans: | ENST00000625103.1:3 ENST00000476211.5:4 ENST00000398207.8:8 BC172448:9 ENST00000459850.5:-16 ENST00000487109.5:-16 BC144588:-16 BC144589:-16 ENST00000614293.4:-23 NM_212533:-23 ENST00000425423.1:74 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_212533 |
| Entrez ID: | 20 |
| Nearest Unigene: | Hs.421202 |
| Nearest Refseq: | NM_001606 |
| Nearest Ensembl: | ENSG00000107331 |
| Gene Name: | ATP binding cassette subfamily A member 2 |
| Gene Alias: | ABC2 |
| Gene Description: | ATP binding cassette subfamily A member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
