Difference between revisions of "TSS:Hg 243186.1"
From referenceTSS
| Line 7: | Line 7: | ||
|UEV-2= | |UEV-2= | ||
|UEV2= | |UEV2= | ||
| + | |all_trans=ENST00000371600.7:118 AK054950:118 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| − | |distance= | + | |distance=118 |
| − | |distance_to_tss= | + | |distance_to_tss=52360 |
|end=48060801 | |end=48060801 | ||
|end_of_center_position=137044210 | |end_of_center_position=137044210 | ||
|entrez_id=7336 | |entrez_id=7336 | ||
|gc_percent=0.348259 | |gc_percent=0.348259 | ||
| − | |gene_alias=DDVIT1 | + | |gene_alias=DDVIT1{{!}}DDVit-1{{!}}EDAF-1{{!}}EDPF-1{{!}}EDPF1{{!}}MMS2{{!}}UEV-2{{!}}UEV2 |
|gene_description=ubiquitin conjugating enzyme E2 V2 | |gene_description=ubiquitin conjugating enzyme E2 V2 | ||
| − | |gene_name= | + | |gene_id=56654 |
| + | |gene_name=neural proliferation, differentiation and control 1 | ||
| + | |gene_source=HGNC:7899 | ||
| + | |gene_symbol=NPDC1 | ||
| + | |gene_synonyms=CAB- CAB1 DKFZp586J0523 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7899 | ||
|nearest_ensembl=ENSG00000169139 | |nearest_ensembl=ENSG00000169139 | ||
|nearest_promoter_id=NM_003350 | |nearest_promoter_id=NM_003350 | ||
|nearest_refseq=NM_003350 | |nearest_refseq=NM_003350 | ||
|nearest_unigene=Hs.491695 | |nearest_unigene=Hs.491695 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=48060781 | |start=48060781 | ||
|start_of_center_position=137044209 | |start_of_center_position=137044209 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000371600.7 AK054950 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243186.1 | |tss_id=hg_243186.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q5SPY9 | ||
}} | }} | ||
Revision as of 16:33, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137044209 |
|---|---|
| End of the center position in the TSS region: | 137044210 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371600.7 AK054950 |
|---|---|
| Distance: | 118 |
| Num_trans: | 2 |
| All_trans: | ENST00000371600.7:118 AK054950:118 |
TATA-Box annotation
| Distance to TSS: | 52360 |
|---|---|
| Nearest PromoterID: | NM_003350 |
| Entrez ID: | 7336 |
| Nearest Unigene: | Hs.491695 |
| Nearest Refseq: | NM_003350 |
| Nearest Ensembl: | ENSG00000169139 |
| Gene Name: | neural proliferation, differentiation and control 1 |
| Gene Alias: | DDVIT1|DDVit-1|EDAF-1|EDPF-1|EDPF1|MMS2|UEV-2|UEV2 |
| Gene Description: | ubiquitin conjugating enzyme E2 V2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.348259 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
