Difference between revisions of "TSS:Hg 103320.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=EU588721:211 DQ355157:-315 BC140911:-348 LG052440:371 | + | |all_trans=EU588721:211 DQ355157:-315 BC140911:-348 LG052440:371 LY497160:371 LY497816:371 LY498505:371 LY500074:371 MS884347:371 MS885193:371 MS996882:371 MA822732:371 MB472890:371 LF160484:386 LF632675:386 LQ070521:386 LQ970677:386 LY496968:386 LY497636:386 LY498287:386 LY499877:386 MA405942:386 MA644022:386 MA731906:386 MS884155:386 MS884996:386 MS996702:386 MA801075:386 MA822395:386 MB472653:386 ENST00000371542.3:-391 NM_001013653:-391 LF212872:-430 MA448449:-430 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_037416 | |nearest_refseq=NR_037416 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=34 |
|species=human | |species=human | ||
|start=137169640 | |start=137169640 | ||
Revision as of 17:24, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 137169650 |
|---|---|
| End of the center position in the TSS region: | 137169651 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | EU588721 |
|---|---|
| Distance: | 211 |
| Num_trans: | 34 |
| All_trans: | EU588721:211 DQ355157:-315 BC140911:-348 LG052440:371 LY497160:371 LY497816:371 LY498505:371 LY500074:371 MS884347:371 MS885193:371 MS996882:371 MA822732:371 MB472890:371 LF160484:386 LF632675:386 LQ070521:386 LQ970677:386 LY496968:386 LY497636:386 LY498287:386 LY499877:386 MA405942:386 MA644022:386 MA731906:386 MS884155:386 MS884996:386 MS996702:386 MA801075:386 MA822395:386 MB472653:386 ENST00000371542.3:-391 NM_001013653:-391 LF212872:-430 MA448449:-430 |
TATA-Box annotation
| Distance to TSS: | -380 |
|---|---|
| Nearest PromoterID: | NR_037416 |
| Entrez ID: | 100500811 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_037416 |
| Nearest Ensembl: | ENSG00000263697 |
| Gene Name: | leucine rich repeat containing 26 |
| Gene Alias: | - |
| Gene Description: | microRNA 3621 |
| Gene Type: | ncRNA |
| CpG%: | 0.12 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
