Difference between revisions of "TSS:Hg 103330.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=NM_013366: | + | |all_trans=ENST00000323927.3:47 NM_013366:47 AK294601:47 ENST00000618649.1:58 AK296204:58 BC032503:70 AF191337:75 KJ898735:75 DQ890852:75 DQ894007:75 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| − | |distance= | + | |distance=47 |
| − | |distance_to_tss=- | + | |distance_to_tss=-52 |
|end=137188617 | |end=137188617 | ||
|end_of_center_position=137188612 | |end_of_center_position=137188612 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_013366 | |nearest_refseq=NM_013366 | ||
|nearest_unigene=Hs.533262 | |nearest_unigene=Hs.533262 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=137188606 | |start=137188606 | ||
|start_of_center_position=137188611 | |start_of_center_position=137188611 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_013366 | + | |transcript_name=ENST00000323927.3 NM_013366 AK294601 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103330.1 | |tss_id=hg_103330.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9UJX6 | + | |uniprot_id=B4DGH7 Q9UJX6 |
}} | }} | ||
Revision as of 17:24, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137188611 |
|---|---|
| End of the center position in the TSS region: | 137188612 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000323927.3 NM_013366 AK294601 |
|---|---|
| Distance: | 47 |
| Num_trans: | 10 |
| All_trans: | ENST00000323927.3:47 NM_013366:47 AK294601:47 ENST00000618649.1:58 AK296204:58 BC032503:70 AF191337:75 KJ898735:75 DQ890852:75 DQ894007:75 |
TATA-Box annotation
| Distance to TSS: | -52 |
|---|---|
| Nearest PromoterID: | NM_013366 |
| Entrez ID: | 29882 |
| Nearest Unigene: | Hs.533262 |
| Nearest Refseq: | NM_013366 |
| Nearest Ensembl: | ENSG00000176248 |
| Gene Name: | anaphase promoting complex subunit 2 |
| Gene Alias: | APC2 |
| Gene Description: | anaphase promoting complex subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
