Difference between revisions of "TSS:Hg 16807.1"
From referenceTSS
| Line 8: | Line 8: | ||
|YKL40= | |YKL40= | ||
|YYL-40= | |YYL-40= | ||
| − | |all_trans=EU831608:-223 EU831695:-223 BT007223:-223 DQ890777:-223 | + | |all_trans=EU831608:-223 EU831695:-223 BT007223:-223 DQ890777:-223 KJ896597:-223 KJ896598:-223 DQ893937:-223 CU678995:-223 BC038354:-281 BC039132:-290 M80927:-294 AK225266:-303 AK225584:-303 ENST00000255409.8:-304 NM_001276:-304 AK130142:-304 AK130200:-304 BC008568:-340 AK312911:-377 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=-223 | |distance=-223 | ||
| − | |distance_to_tss= | + | |distance_to_tss=316 |
|end=203186400 | |end=203186400 | ||
|end_of_center_position=203186388 | |end_of_center_position=203186388 | ||
|entrez_id=1116 | |entrez_id=1116 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=ASRT7 | + | |gene_alias=ASRT7{{!}}CGP-39{{!}}GP-39{{!}}GP39{{!}}HC-gp39{{!}}HCGP-3P{{!}}YK-40{{!}}YKL-40{{!}}YKL40{{!}}YYL-40{{!}}hCGP-39 |
|gene_description=chitinase 3 like 1 | |gene_description=chitinase 3 like 1 | ||
|gene_id=1116 | |gene_id=1116 | ||
| Line 23: | Line 23: | ||
|gene_source=HGNC:1932 | |gene_source=HGNC:1932 | ||
|gene_symbol=CHI3L1 | |gene_symbol=CHI3L1 | ||
| − | |gene_synonyms=GP39 YKL40 | + | |gene_synonyms=GP39 YK-40 YKL40 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hCGP-39= | |hCGP-39= | ||
| Line 31: | Line 31: | ||
|nearest_refseq=NM_001276 | |nearest_refseq=NM_001276 | ||
|nearest_unigene=Hs.382202 | |nearest_unigene=Hs.382202 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=203186375 | |start=203186375 | ||
|start_of_center_position=203186387 | |start_of_center_position=203186387 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=EU831608 EU831695 BT007223 DQ890777 KJ896598 | + | |transcript_name=EU831608 EU831695 BT007223 DQ890777 KJ896597 KJ896598 DQ893937 CU678995 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_16807.1 | |tss_id=hg_16807.1 | ||
Revision as of 18:24, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 203186387 |
|---|---|
| End of the center position in the TSS region: | 203186388 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | EU831608 EU831695 BT007223 DQ890777 KJ896597 KJ896598 DQ893937 CU678995 |
|---|---|
| Distance: | -223 |
| Num_trans: | 19 |
| All_trans: | EU831608:-223 EU831695:-223 BT007223:-223 DQ890777:-223 KJ896597:-223 KJ896598:-223 DQ893937:-223 CU678995:-223 BC038354:-281 BC039132:-290 M80927:-294 AK225266:-303 AK225584:-303 ENST00000255409.8:-304 NM_001276:-304 AK130142:-304 AK130200:-304 BC008568:-340 AK312911:-377 |
TATA-Box annotation
| Distance to TSS: | 316 |
|---|---|
| Nearest PromoterID: | NM_001276 |
| Entrez ID: | 1116 |
| Nearest Unigene: | Hs.382202 |
| Nearest Refseq: | NM_001276 |
| Nearest Ensembl: | ENSG00000133048 |
| Gene Name: | chitinase 3 like 1 |
| Gene Alias: | ASRT7|CGP-39|GP-39|GP39|HC-gp39|HCGP-3P|YK-40|YKL-40|YKL40|YYL-40|hCGP-39 |
| Gene Description: | chitinase 3 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
