Difference between revisions of "TSS:Hg 106686.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=14 |entrez_id=9221 |gc_percent=0.621891 |gene_alias=NOPP130|NOPP140|NS5ATP13|P130 |gene_description=nucleolar and coiled-body p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NOPP140= | ||
| + | |NS5ATP13= | ||
| + | |P130= | ||
| + | |all_trans=ENST00000605788.5:0 ENST00000405356.5:0 NM_001284388:0 NM_001284389:0 NM_004741:0 uc001kuo.4:0 uc001kup.3:0 Z34289:150 AK225101:179 AK314363:179 ENST00000464969.6:185 uc057vpb.1:185 AK056755:185 ENST00000488254.6:194 ENST00000603946.5:194 uc001kuq.4:194 uc057vpc.1:194 BC001883:194 BC006769:194 ENST00000461421.5:199 uc057vpd.1:199 DQ891862:200 DQ895051:200 AB383719:201 AY820769:201 ENST00000476468.5:203 uc057vpe.1:203 ENST00000370007.5:205 uc057vpf.1:205 D21262:205 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=14 | |distance_to_tss=14 | ||
| + | |end=102152210 | ||
|entrez_id=9221 | |entrez_id=9221 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=NOPP130|NOPP140|NS5ATP13|P130 | |gene_alias=NOPP130|NOPP140|NS5ATP13|P130 | ||
|gene_description=nucleolar and coiled-body phosphoprotein 1 | |gene_description=nucleolar and coiled-body phosphoprotein 1 | ||
| − | |gene_name=NOLC1 | + | |gene_id=9221 |
| + | |gene_name=nucleolar and coiled-body phosphoprotein 1 | ||
| + | |gene_source=HGNC:15608 | ||
| + | |gene_symbol=NOLC1 | ||
| + | |gene_synonyms=KIAA0035 NOPP130 NOPP140 P130 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:15608 | ||
|nearest_ensembl=ENSG00000166197 | |nearest_ensembl=ENSG00000166197 | ||
|nearest_promoter_id=NM_001284389 | |nearest_promoter_id=NM_001284389 | ||
|nearest_refseq=NM_004741 | |nearest_refseq=NM_004741 | ||
|nearest_unigene=Hs.523238 | |nearest_unigene=Hs.523238 | ||
| + | |num_trans=30 | ||
| + | |species=human | ||
| + | |start=102152169 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000605788.5 ENST00000405356.5 NM_001284388 NM_001284389 NM_004741 uc001kuo.4 uc001kup.3 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106686.1 | |tss_id=hg_106686.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q14978 Q96J17 | ||
}} | }} | ||
Revision as of 22:29, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000605788.5 ENST00000405356.5 NM_001284388 NM_001284389 NM_004741 uc001kuo.4 uc001kup.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 30 |
| All_trans: | ENST00000605788.5:0 ENST00000405356.5:0 NM_001284388:0 NM_001284389:0 NM_004741:0 uc001kuo.4:0 uc001kup.3:0 Z34289:150 AK225101:179 AK314363:179 ENST00000464969.6:185 uc057vpb.1:185 AK056755:185 ENST00000488254.6:194 ENST00000603946.5:194 uc001kuq.4:194 uc057vpc.1:194 BC001883:194 BC006769:194 ENST00000461421.5:199 uc057vpd.1:199 DQ891862:200 DQ895051:200 AB383719:201 AY820769:201 ENST00000476468.5:203 uc057vpe.1:203 ENST00000370007.5:205 uc057vpf.1:205 D21262:205 |
TATA-Box annotation
| Distance to TSS: | 14 |
|---|---|
| Nearest PromoterID: | NM_001284389 |
| Entrez ID: | 9221 |
| Nearest Unigene: | Hs.523238 |
| Nearest Refseq: | NM_004741 |
| Nearest Ensembl: | ENSG00000166197 |
| Gene Name: | nucleolar and coiled-body phosphoprotein 1 |
| Gene Alias: | NOPP130 |
| Gene Description: | nucleolar and coiled-body phosphoprotein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
