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Difference between revisions of "Template:PeakPage"

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<span class="section_head">Basic information about the peak</span>
 
<span class="section_head">Basic information about the peak</span>
 
<hr width="500px" size="2" noshade>
 
<hr width="500px" size="2" noshade>
 +
<table><tr><td>
 +
<div style="width:42%; float:left;margin-right:20px">
 
<table>
 
<table>
 
<tr><th scope="row" style="text-align:left;width:100px">PeakID:</th><td>[[peak_id::{{{peak_id}}}]]</td></tr>
 
<tr><th scope="row" style="text-align:left;width:100px">PeakID:</th><td>[[peak_id::{{{peak_id}}}]]</td></tr>
 
<tr><th scope="row" align="left">[[Property:species|Species]]:</th><td>[[species::{{{species}}}]]</td></tr>
 
<tr><th scope="row" align="left">[[Property:species|Species]]:</th><td>[[species::{{{species}}}]]</td></tr>
 
<tr><th scope="row" align="left">Chr:</th><td>[[chr::{{{chr}}}]]</td></tr>
 
<tr><th scope="row" align="left">Chr:</th><td>[[chr::{{{chr}}}]]</td></tr>
 +
</table>
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</div>
 +
<div style="width:42%; float:left;">
 +
<table>
 
<tr><th scope="row" align="left">Start:</th><td>[[start::{{{start}}}]]</td></tr>
 
<tr><th scope="row" align="left">Start:</th><td>[[start::{{{start}}}]]</td></tr>
 
<tr><th scope="row" align="left">End:</th><td>[[end::{{{end}}}]]</td></tr>
 
<tr><th scope="row" align="left">End:</th><td>[[end::{{{end}}}]]</td></tr>
 
<tr><th scope="row" align="left">Strand:</th><td>[[strand::{{{strand}}}]]</td></tr>
 
<tr><th scope="row" align="left">Strand:</th><td>[[strand::{{{strand}}}]]</td></tr>
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</table>
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</div></td></tr>
 
</table>
 
</table>
 
<br/>
 
<br/>

Revision as of 17:14, 7 February 2018



Basic information about the peak


PeakID:{{{peak_id}}}
Species:{{{species}}}
Chr:{{{chr}}}
Start:{{{start}}}
End:{{{end}}}
Strand:{{{strand}}}



TATA-Box annotation


Peak Score:{{{peak_score}}}
Distance to TSS:{{{distance_to_tss}}}
Nearest PromoterID:{{{nearest_promoter_id}}}
Entrez ID:{{{entrez_id}}}
Nearest Unigene:{{{nearest_unigene}}}
Nearest Refseq:{{{nearest_refseq}}}
Nearest Ensembl:{{{nearest_ensembl}}}
Gene Name:{{{gene_name}}}
Gene Alias:{{{gene_alias}}}
Gene Description:{{{gene_description}}}
Gene Type:{{{gene_type}}}
CpG%:{{{cpg_percent}}}
GC%:{{{gc_percent}}}
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):{{{tata_box}}}



Transcript annotation


Transcript_name:{{{transcript_name}}}
Distance:{{{distance}}}
Num_trans:{{{num_trans}}}
All_trans:{{{all_trans}}}



Gene and protein annotation


Transcript_name:{{{transcript_name}}}
Distance:{{{distance}}}
GeneID:{{{gene_id}}}
HGNC/MGI_ID:{{{hgnc_mgi_id}}}
UniProt_ID:{{{uniprot_id}}}
Gene_name:{{{gene_name}}}
Gene_symbol:{{{gene_symbol}}}
Gene_synonyms:{{{gene_synonyms}}}
Gene_source:{{{gene_source}}}



TSS classification


Chr:{{{chr}}}
Start:{{{start}}}
End:{{{end}}}
Strand:{{{strand}}}