Difference between revisions of "Template:PeakPage"
From referenceTSS
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<span class="section_head">Basic information about the peak</span> | <span class="section_head">Basic information about the peak</span> | ||
<hr width="500px" size="2" noshade> | <hr width="500px" size="2" noshade> | ||
+ | <table><tr><td> | ||
+ | <div style="width:42%; float:left;margin-right:20px"> | ||
<table> | <table> | ||
<tr><th scope="row" style="text-align:left;width:100px">PeakID:</th><td>[[peak_id::{{{peak_id}}}]]</td></tr> | <tr><th scope="row" style="text-align:left;width:100px">PeakID:</th><td>[[peak_id::{{{peak_id}}}]]</td></tr> | ||
<tr><th scope="row" align="left">[[Property:species|Species]]:</th><td>[[species::{{{species}}}]]</td></tr> | <tr><th scope="row" align="left">[[Property:species|Species]]:</th><td>[[species::{{{species}}}]]</td></tr> | ||
<tr><th scope="row" align="left">Chr:</th><td>[[chr::{{{chr}}}]]</td></tr> | <tr><th scope="row" align="left">Chr:</th><td>[[chr::{{{chr}}}]]</td></tr> | ||
+ | </table> | ||
+ | </div> | ||
+ | <div style="width:42%; float:left;"> | ||
+ | <table> | ||
<tr><th scope="row" align="left">Start:</th><td>[[start::{{{start}}}]]</td></tr> | <tr><th scope="row" align="left">Start:</th><td>[[start::{{{start}}}]]</td></tr> | ||
<tr><th scope="row" align="left">End:</th><td>[[end::{{{end}}}]]</td></tr> | <tr><th scope="row" align="left">End:</th><td>[[end::{{{end}}}]]</td></tr> | ||
<tr><th scope="row" align="left">Strand:</th><td>[[strand::{{{strand}}}]]</td></tr> | <tr><th scope="row" align="left">Strand:</th><td>[[strand::{{{strand}}}]]</td></tr> | ||
+ | </table> | ||
+ | </div></td></tr> | ||
</table> | </table> | ||
<br/> | <br/> |
Revision as of 17:14, 7 February 2018
Basic information about the peak
|
TATA-Box annotation
Peak Score: | {{{peak_score}}} |
---|---|
Distance to TSS: | {{{distance_to_tss}}} |
Nearest PromoterID: | {{{nearest_promoter_id}}} |
Entrez ID: | {{{entrez_id}}} |
Nearest Unigene: | {{{nearest_unigene}}} |
Nearest Refseq: | {{{nearest_refseq}}} |
Nearest Ensembl: | {{{nearest_ensembl}}} |
Gene Name: | {{{gene_name}}} |
Gene Alias: | {{{gene_alias}}} |
Gene Description: | {{{gene_description}}} |
Gene Type: | {{{gene_type}}} |
CpG%: | {{{cpg_percent}}} |
GC%: | {{{gc_percent}}} |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): | {{{tata_box}}} |
Transcript annotation
Transcript_name: | {{{transcript_name}}} |
---|---|
Distance: | {{{distance}}} |
Num_trans: | {{{num_trans}}} |
All_trans: | {{{all_trans}}} |
Gene and protein annotation
Transcript_name: | {{{transcript_name}}} |
---|---|
Distance: | {{{distance}}} |
GeneID: | {{{gene_id}}} |
HGNC/MGI_ID: | {{{hgnc_mgi_id}}} |
UniProt_ID: | {{{uniprot_id}}} |
Gene_name: | {{{gene_name}}} |
Gene_symbol: | {{{gene_symbol}}} |
Gene_synonyms: | {{{gene_synonyms}}} |
Gene_source: | {{{gene_source}}} |
TSS classification
Chr: | {{{chr}}} |
---|---|
Start: | {{{start}}} |
End: | {{{end}}} |
Strand: | {{{strand}}} |