Difference between revisions of "TSS:Hg 106706.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=331 |entrez_id=4791 |gc_percent=0.636816 |gene_alias=CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 |gene_description=nuclea...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |H2TF1= | ||
| + | |LYT-10= | ||
| + | |LYT10= | ||
| + | |NF-kB2= | ||
| + | |all_trans=AB384801:29 U09609:30 BT009769:30 AK292654:-181 ENST00000610498.1:-218 ENST00000467116.5:-218 ENST00000189444.10:-218 uc057vpn.1:-218 uc057vpo.1:-218 uc001kvd.6:-218 X61499:-218 X61498:-218 ENST00000471698.5:-231 uc057vpm.1:-231 NM_001261403:-328 NM_002502:-328 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=29 | ||
|distance_to_tss=331 | |distance_to_tss=331 | ||
| + | |end=102395930 | ||
|entrez_id=4791 | |entrez_id=4791 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 | |gene_alias=CVID10|H2TF1|LYT-10|LYT10|NF-kB2|p100|p49/p100|p52 | ||
|gene_description=nuclear factor kappa B subunit 2 | |gene_description=nuclear factor kappa B subunit 2 | ||
| − | |gene_name=NFKB2 | + | |gene_id=4791 |
| + | |gene_name=nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 | ||
| + | |gene_source=HGNC:7795 | ||
| + | |gene_symbol=NFKB2 | ||
| + | |gene_synonyms=LYT-10 NF-kB2 p105 p49/p100 p52 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7795 | ||
|nearest_ensembl=ENSG00000077150 | |nearest_ensembl=ENSG00000077150 | ||
|nearest_promoter_id=NM_001261403 | |nearest_promoter_id=NM_001261403 | ||
|nearest_refseq=NM_002502 | |nearest_refseq=NM_002502 | ||
|nearest_unigene=Hs.73090 | |nearest_unigene=Hs.73090 | ||
| + | |num_trans=16 | ||
| + | |p100= | ||
| + | |p49/p100= | ||
| + | |p52= | ||
| + | |species=human | ||
| + | |start=102395923 | ||
| + | |strand=+ | ||
| + | |transcript_name=AB384801 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106706.1 | |tss_id=hg_106706.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB384801 |
|---|---|
| Distance: | 29 |
| Num_trans: | 16 |
| All_trans: | AB384801:29 U09609:30 BT009769:30 AK292654:-181 ENST00000610498.1:-218 ENST00000467116.5:-218 ENST00000189444.10:-218 uc057vpn.1:-218 uc057vpo.1:-218 uc001kvd.6:-218 X61499:-218 X61498:-218 ENST00000471698.5:-231 uc057vpm.1:-231 NM_001261403:-328 NM_002502:-328 |
TATA-Box annotation
| Distance to TSS: | 331 |
|---|---|
| Nearest PromoterID: | NM_001261403 |
| Entrez ID: | 4791 |
| Nearest Unigene: | Hs.73090 |
| Nearest Refseq: | NM_002502 |
| Nearest Ensembl: | ENSG00000077150 |
| Gene Name: | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 |
| Gene Alias: | CVID10 |
| Gene Description: | nuclear factor kappa B subunit 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
