Difference between revisions of "TSS:Hg 106720.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=-1511 |entrez_id=5662 |gc_percent=0.711443 |gene_alias=EFA6|EFA6A|PSD1|TYL |gene_description=pleckstrin and Sec7 domain containin...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |EFA6A= | ||
| + | |PSD1= | ||
| + | |TYL= | ||
| + | |all_trans=KJ903162:-286 KJ899530:-296 BC002912:-378 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=-286 | ||
|distance_to_tss=-1511 | |distance_to_tss=-1511 | ||
| + | |end=102421464 | ||
|entrez_id=5662 | |entrez_id=5662 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_002779 | |nearest_refseq=NM_002779 | ||
|nearest_unigene=Hs.154658 | |nearest_unigene=Hs.154658 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=102421425 | ||
| + | |strand=+ | ||
| + | |transcript_name=KJ903162 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106720.1 | |tss_id=hg_106720.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 22:30, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ903162 |
|---|---|
| Distance: | -286 |
| Num_trans: | 3 |
| All_trans: | KJ903162:-286 KJ899530:-296 BC002912:-378 |
TATA-Box annotation
| Distance to TSS: | -1511 |
|---|---|
| Nearest PromoterID: | NM_001270965 |
| Entrez ID: | 5662 |
| Nearest Unigene: | Hs.154658 |
| Nearest Refseq: | NM_002779 |
| Nearest Ensembl: | ENSG00000059915 |
| Gene Name: | PSD |
| Gene Alias: | EFA6 |
| Gene Description: | pleckstrin and Sec7 domain containing |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
