Difference between revisions of "TSS:Mm 101076.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Zfpn1a1= | |Zfpn1a1= | ||
|Znfn1a1= | |Znfn1a1= | ||
| − | |all_trans=ENSMUST00000145789.1:225 AK040327:225 | + | |all_trans=NR_166812:0 ENSMUST00000145789.1:225 AK040327:225 KY467564:225 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-285 | |distance_to_tss=-285 | ||
|end=11685655 | |end=11685655 | ||
| Line 13: | Line 13: | ||
|entrez_id=22778 | |entrez_id=22778 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=5832432G11Rik | + | |gene_alias=5832432G11Rik{{!}}Ikaros{{!}}LyF-1{{!}}Zfpn1a1{{!}}Znfn1a1{{!}}hlk-1{{!}}mKIAA4227 |
|gene_description=IKAROS family zinc finger 1 | |gene_description=IKAROS family zinc finger 1 | ||
|gene_id=102631840 | |gene_id=102631840 | ||
| Line 25: | Line 25: | ||
|mKIAA4227= | |mKIAA4227= | ||
|nearest_ensembl=ENSMUSG00000018654 | |nearest_ensembl=ENSMUSG00000018654 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001301868 |
|nearest_refseq=NM_009578 | |nearest_refseq=NM_009578 | ||
|nearest_unigene=Mm.103545 | |nearest_unigene=Mm.103545 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=11685624 | |start=11685624 | ||
|start_of_center_position=11685639 | |start_of_center_position=11685639 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NR_166812 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101076.1 | |tss_id=mm_101076.1 | ||
Revision as of 16:32, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11685639 |
|---|---|
| End of the center position in the TSS region: | 11685640 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_166812 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NR_166812:0 ENSMUST00000145789.1:225 AK040327:225 KY467564:225 |
TATA-Box annotation
| Distance to TSS: | -285 |
|---|---|
| Nearest PromoterID: | NM_001301868 |
| Entrez ID: | 22778 |
| Nearest Unigene: | Mm.103545 |
| Nearest Refseq: | NM_009578 |
| Nearest Ensembl: | ENSMUSG00000018654 |
| Gene Name: | predicted gene 11999 |
| Gene Alias: | 5832432G11Rik|Ikaros|LyF-1|Zfpn1a1|Znfn1a1|hlk-1|mKIAA4227 |
| Gene Description: | IKAROS family zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
