Difference between revisions of "TSS:Mm 101284.1"
From referenceTSS
| Line 5: | Line 5: | ||
|Mor-2= | |Mor-2= | ||
|Mor2= | |Mor2= | ||
| − | |all_trans= | + | |all_trans=ENSMUST00000239073.1:104 NM_008618:104 NM_001316675:104 ENSMUST00000102874.10:-144 ENSMUST00000238916.1:-144 AK005237:208 AK046369:220 AK077724:222 AK164785:224 M29462:225 AK002395:226 AK008270:232 BC050940:238 AK002404:246 AK168545:267 ENSMUST00000125302.1:-318 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 14: | Line 14: | ||
|entrez_id=17449 | |entrez_id=17449 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=B230377B03Rik | + | |gene_alias=B230377B03Rik{{!}}D17921{{!}}MDH-s{{!}}MDHA{{!}}Mor-2{{!}}Mor2 |
| − | |gene_description= | + | |gene_description=malate dehydrogenase 1, NAD (soluble) |
|gene_id=17449 | |gene_id=17449 | ||
| − | |gene_name= | + | |gene_name=malate dehydrogenase 1, NAD (soluble) |
|gene_source=MGI:97051 | |gene_source=MGI:97051 | ||
|gene_symbol=Mdh1 | |gene_symbol=Mdh1 | ||
| Line 32: | Line 32: | ||
|start_of_center_position=21572043 | |start_of_center_position=21572043 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001316675 | + | |transcript_name=ENSMUST00000239073.1 NM_008618 NM_001316675 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_101284.1 | |tss_id=mm_101284.1 | ||
Revision as of 16:36, 19 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21572043 |
|---|---|
| End of the center position in the TSS region: | 21572044 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000239073.1 NM_008618 NM_001316675 |
|---|---|
| Distance: | 104 |
| Num_trans: | 16 |
| All_trans: | ENSMUST00000239073.1:104 NM_008618:104 NM_001316675:104 ENSMUST00000102874.10:-144 ENSMUST00000238916.1:-144 AK005237:208 AK046369:220 AK077724:222 AK164785:224 M29462:225 AK002395:226 AK008270:232 BC050940:238 AK002404:246 AK168545:267 ENSMUST00000125302.1:-318 |
TATA-Box annotation
| Distance to TSS: | -109 |
|---|---|
| Nearest PromoterID: | NM_001316675 |
| Entrez ID: | 17449 |
| Nearest Unigene: | Mm.212703 |
| Nearest Refseq: | NM_008618 |
| Nearest Ensembl: | ENSMUSG00000020321 |
| Gene Name: | malate dehydrogenase 1, NAD (soluble) |
| Gene Alias: | B230377B03Rik|D17921|MDH-s|MDHA|Mor-2|Mor2 |
| Gene Description: | malate dehydrogenase 1, NAD (soluble) |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
