Difference between revisions of "TSS:Hg 103407.1"
From referenceTSS
| Line 2: | Line 2: | ||
|BS69= | |BS69= | ||
|MRD30= | |MRD30= | ||
| − | |all_trans= | + | |all_trans=ENST00000381604.9:0 ENST00000602682.6:0 NM_001370121:0 NM_001370123:0 NM_001202464:0 NM_001370117:0 NM_001370112:0 NM_001370100:0 ENST00000403354.5:7 ENST00000381607.8:7 BC091489:7 ENST00000627286.2:31 ENST00000402736.5:32 ENST00000397955.7:42 NM_001370101:121 NM_001370114:-166 NM_001370111:-166 NM_001370110:-166 NM_001370099:-166 NM_001370108:-166 NM_001370109:332 NM_001370102:332 ENST00000381591.5:-362 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-1 |
|end=135477 | |end=135477 | ||
|end_of_center_position=135454 | |end_of_center_position=135454 | ||
|entrez_id=10771 | |entrez_id=10771 | ||
|gc_percent=0.850746 | |gc_percent=0.850746 | ||
| − | |gene_alias=BRAM1 | + | |gene_alias=BRAM1{{!}}BS69{{!}}MRD30 |
|gene_description=zinc finger MYND-type containing 11 | |gene_description=zinc finger MYND-type containing 11 | ||
|gene_id=10771 | |gene_id=10771 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:16966 | |hgnc_mgi_id=HGNC:16966 | ||
|nearest_ensembl=ENSG00000015171 | |nearest_ensembl=ENSG00000015171 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370100 |
|nearest_refseq=NM_006624 | |nearest_refseq=NM_006624 | ||
|nearest_unigene=Hs.292265 | |nearest_unigene=Hs.292265 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=135430 | |start=135430 | ||
|start_of_center_position=135453 | |start_of_center_position=135453 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000381604.9 ENST00000602682.6 NM_001370121 NM_001370123 NM_001202464 NM_001370117 NM_001370112 NM_001370100 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103407.1 | |tss_id=hg_103407.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A0A0MRY2 Q15326 Q5UGI2 |
}} | }} | ||
Revision as of 17:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135453 |
|---|---|
| End of the center position in the TSS region: | 135454 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000381604.9 ENST00000602682.6 NM_001370121 NM_001370123 NM_001202464 NM_001370117 NM_001370112 NM_001370100 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000381604.9:0 ENST00000602682.6:0 NM_001370121:0 NM_001370123:0 NM_001202464:0 NM_001370117:0 NM_001370112:0 NM_001370100:0 ENST00000403354.5:7 ENST00000381607.8:7 BC091489:7 ENST00000627286.2:31 ENST00000402736.5:32 ENST00000397955.7:42 NM_001370101:121 NM_001370114:-166 NM_001370111:-166 NM_001370110:-166 NM_001370099:-166 NM_001370108:-166 NM_001370109:332 NM_001370102:332 ENST00000381591.5:-362 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001370100 |
| Entrez ID: | 10771 |
| Nearest Unigene: | Hs.292265 |
| Nearest Refseq: | NM_006624 |
| Nearest Ensembl: | ENSG00000015171 |
| Gene Name: | zinc finger MYND-type containing 11 |
| Gene Alias: | BRAM1|BS69|MRD30 |
| Gene Description: | zinc finger MYND-type containing 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.850746 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
