Difference between revisions of "TSS:Hg 103624.1"
From referenceTSS
| Line 6: | Line 6: | ||
|HSD17B5= | |HSD17B5= | ||
|PGFS= | |PGFS= | ||
| − | |all_trans=ENST00000480697.6:0 ENST00000605322.1:0 | + | |all_trans=ENST00000480697.6:0 ENST00000380554.5:0 ENST00000605322.1:0 NM_003739:0 NM_001253909:0 AB018580:0 AK296701:0 AK315411:0 AK290365:0 AK310940:0 BC019230:0 S68288:0 AF149416:3 CU674730:9 CU676394:9 AM392923:9 KJ892585:9 KJ897885:9 KR710495:9 DQ893860:9 GQ129450:9 GQ129451:9 AB383754:9 BT007286:9 DQ890679:9 D17793:-10 BC001479:-15 LP747418:-28 MB486558:-28 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=6 |
|end=5094436 | |end=5094436 | ||
|end_of_center_position=5094420 | |end_of_center_position=5094420 | ||
|entrez_id=8644 | |entrez_id=8644 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=DD3 | + | |gene_alias=DD3{{!}}DDX{{!}}HA1753{{!}}HAKRB{{!}}HAKRe{{!}}HSD17B5{{!}}PGFS{{!}}hluPGFS |
|gene_description=aldo-keto reductase family 1 member C3 | |gene_description=aldo-keto reductase family 1 member C3 | ||
|gene_id=8644 | |gene_id=8644 | ||
| − | |gene_name= | + | |gene_name=aldo-keto reductase family 1 member C3 |
|gene_source=HGNC:386 | |gene_source=HGNC:386 | ||
|gene_symbol=AKR1C3 | |gene_symbol=AKR1C3 | ||
| Line 26: | Line 26: | ||
|hluPGFS= | |hluPGFS= | ||
|nearest_ensembl=ENSG00000196139 | |nearest_ensembl=ENSG00000196139 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001253909 |
|nearest_refseq=NM_003739 | |nearest_refseq=NM_003739 | ||
|nearest_unigene=Hs.78183 | |nearest_unigene=Hs.78183 | ||
| − | |num_trans= | + | |num_trans=29 |
|species=human | |species=human | ||
|start=5094403 | |start=5094403 | ||
|start_of_center_position=5094419 | |start_of_center_position=5094419 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000480697.6 ENST00000605322.1 | + | |transcript_name=ENST00000480697.6 ENST00000380554.5 ENST00000605322.1 NM_003739 NM_001253909 AB018580 AK296701 AK315411 AK290365 AK310940 BC019230 S68288 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103624.1 | |tss_id=hg_103624.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DKT3 | + | |uniprot_id=B4DKT3 P42330 |
}} | }} | ||
Revision as of 17:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5094419 |
|---|---|
| End of the center position in the TSS region: | 5094420 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000480697.6 ENST00000380554.5 ENST00000605322.1 NM_003739 NM_001253909 AB018580 AK296701 AK315411 AK290365 AK310940 BC019230 S68288 |
|---|---|
| Distance: | 0 |
| Num_trans: | 29 |
| All_trans: | ENST00000480697.6:0 ENST00000380554.5:0 ENST00000605322.1:0 NM_003739:0 NM_001253909:0 AB018580:0 AK296701:0 AK315411:0 AK290365:0 AK310940:0 BC019230:0 S68288:0 AF149416:3 CU674730:9 CU676394:9 AM392923:9 KJ892585:9 KJ897885:9 KR710495:9 DQ893860:9 GQ129450:9 GQ129451:9 AB383754:9 BT007286:9 DQ890679:9 D17793:-10 BC001479:-15 LP747418:-28 MB486558:-28 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_001253909 |
| Entrez ID: | 8644 |
| Nearest Unigene: | Hs.78183 |
| Nearest Refseq: | NM_003739 |
| Nearest Ensembl: | ENSG00000196139 |
| Gene Name: | aldo-keto reductase family 1 member C3 |
| Gene Alias: | DD3|DDX|HA1753|HAKRB|HAKRe|HSD17B5|PGFS|hluPGFS |
| Gene Description: | aldo-keto reductase family 1 member C3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
