Difference between revisions of "TSS:Hg 103628.1"
From referenceTSS
| Line 6: | Line 6: | ||
|DD4= | |DD4= | ||
|HAKRA= | |HAKRA= | ||
| − | |all_trans=ENST00000263126. | + | |all_trans=ENST00000263126.3:0 NM_001818:0 LP747419:0 BC020744:0 MB486559:0 S68287:17 CU676682:24 KJ896595:24 KR711253:24 DQ894598:24 AB031085:24 DQ891424:24 AB045829:24 M33375:27 D26125:28 AK314988:-37 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=5196844 | |end=5196844 | ||
|end_of_center_position=5196838 | |end_of_center_position=5196838 | ||
|entrez_id=1109 | |entrez_id=1109 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=3-alpha-HSD | + | |gene_alias=3-alpha-HSD{{!}}C11{{!}}CDR{{!}}CHDR{{!}}DD-4{{!}}DD4{{!}}HAKRA |
|gene_description=aldo-keto reductase family 1 member C4 | |gene_description=aldo-keto reductase family 1 member C4 | ||
|gene_id=1109 | |gene_id=1109 | ||
| − | |gene_name= | + | |gene_name=aldo-keto reductase family 1 member C4 |
|gene_source=HGNC:387 | |gene_source=HGNC:387 | ||
|gene_symbol=AKR1C4 | |gene_symbol=AKR1C4 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_001818 | |nearest_refseq=NM_001818 | ||
|nearest_unigene=Hs.567245 | |nearest_unigene=Hs.567245 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=5196830 | |start=5196830 | ||
|start_of_center_position=5196837 | |start_of_center_position=5196837 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000263126. | + | |transcript_name=ENST00000263126.3 NM_001818 LP747419 BC020744 MB486559 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103628.1 | |tss_id=hg_103628.1 | ||
Revision as of 17:31, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 5196837 |
|---|---|
| End of the center position in the TSS region: | 5196838 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000263126.3 NM_001818 LP747419 BC020744 MB486559 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000263126.3:0 NM_001818:0 LP747419:0 BC020744:0 MB486559:0 S68287:17 CU676682:24 KJ896595:24 KR711253:24 DQ894598:24 AB031085:24 DQ891424:24 AB045829:24 M33375:27 D26125:28 AK314988:-37 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001818 |
| Entrez ID: | 1109 |
| Nearest Unigene: | Hs.567245 |
| Nearest Refseq: | NM_001818 |
| Nearest Ensembl: | ENSG00000198610 |
| Gene Name: | aldo-keto reductase family 1 member C4 |
| Gene Alias: | 3-alpha-HSD|C11|CDR|CHDR|DD-4|DD4|HAKRA |
| Gene Description: | aldo-keto reductase family 1 member C4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
