Difference between revisions of "TSS:Hg 103677.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000437845.6:0 ENST00000432931.5:0 | + | |all_trans=ENST00000379888.9:0 ENST00000437845.6:0 ENST00000432931.5:0 NM_032905:0 AF542550:0 AK314952:0 BC007871:0 ENST00000446108.5:262 NM_001145547:262 BC039322:262 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=6089084 | |end=6089084 | ||
|end_of_center_position=6089044 | |end_of_center_position=6089044 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_032905 | |nearest_refseq=NM_032905 | ||
|nearest_unigene=Hs.498548 | |nearest_unigene=Hs.498548 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=6089003 | |start=6089003 | ||
|start_of_center_position=6089043 | |start_of_center_position=6089043 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000437845.6 ENST00000432931.5 | + | |transcript_name=ENST00000379888.9 ENST00000437845.6 ENST00000432931.5 NM_032905 AF542550 AK314952 BC007871 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103677.1 | |tss_id=hg_103677.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5W010 Q5W012 | + | |uniprot_id=Q5W009 Q5W010 Q5W012 Q96I25 |
}} | }} | ||
Revision as of 17:32, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6089043 |
|---|---|
| End of the center position in the TSS region: | 6089044 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000379888.9 ENST00000437845.6 ENST00000432931.5 NM_032905 AF542550 AK314952 BC007871 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000379888.9:0 ENST00000437845.6:0 ENST00000432931.5:0 NM_032905:0 AF542550:0 AK314952:0 BC007871:0 ENST00000446108.5:262 NM_001145547:262 BC039322:262 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_032905 |
| Entrez ID: | 84991 |
| Nearest Unigene: | Hs.498548 |
| Nearest Refseq: | NM_032905 |
| Nearest Ensembl: | ENSG00000134453 |
| Gene Name: | RNA binding motif protein 17 |
| Gene Alias: | SPF45 |
| Gene Description: | RNA binding motif protein 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
