Difference between revisions of "TSS:Hg 232335.1"
From referenceTSS
| Line 4: | Line 4: | ||
|IMD41= | |IMD41= | ||
|TCGFR= | |TCGFR= | ||
| − | |all_trans= | + | |all_trans=AJ227868:442 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=442 |
| − | |distance_to_tss= | + | |distance_to_tss=36 |
|end=6062331 | |end=6062331 | ||
|end_of_center_position=6234854 | |end_of_center_position=6234854 | ||
|entrez_id=3559 | |entrez_id=3559 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| − | |gene_alias=CD25 | + | |gene_alias=CD25{{!}}IDDM10{{!}}IL2R{{!}}IMD41{{!}}TCGFR{{!}}p55 |
|gene_description=interleukin 2 receptor subunit alpha | |gene_description=interleukin 2 receptor subunit alpha | ||
| − | |gene_id= | + | |gene_id=5209 |
| − | |gene_name= | + | |gene_name=6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:8874 |
| − | |gene_symbol= | + | |gene_symbol=PFKFB3 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:8874 |
|nearest_ensembl=ENSG00000134460 | |nearest_ensembl=ENSG00000134460 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001308242 |
|nearest_refseq=NM_000417 | |nearest_refseq=NM_000417 | ||
|nearest_unigene=Hs.231367 | |nearest_unigene=Hs.231367 | ||
| − | |num_trans= | + | |num_trans=1 |
|p55= | |p55= | ||
|species=human | |species=human | ||
| Line 32: | Line 32: | ||
|start_of_center_position=6234853 | |start_of_center_position=6234853 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AJ227868 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232335.1 | |tss_id=hg_232335.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:22, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6234853 |
|---|---|
| End of the center position in the TSS region: | 6234854 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AJ227868 |
|---|---|
| Distance: | 442 |
| Num_trans: | 1 |
| All_trans: | AJ227868:442 |
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_001308242 |
| Entrez ID: | 3559 |
| Nearest Unigene: | Hs.231367 |
| Nearest Refseq: | NM_000417 |
| Nearest Ensembl: | ENSG00000134460 |
| Gene Name: | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 |
| Gene Alias: | CD25|IDDM10|IL2R|IMD41|TCGFR|p55 |
| Gene Description: | interleukin 2 receptor subunit alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
