Difference between revisions of "TSS:Hg 103711.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AY007155:24 ENST00000455810.5:-40 | + | |all_trans=ENST00000663449.1:0 AY007155:24 ENST00000455810.5:-40 NR_036502:-40 NR_036503:-40 ENST00000667809.1:41 ENST00000445427.1:-46 ENST00000613651.2:47 LP895775:-66 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=65 | |distance_to_tss=65 | ||
|end=6580515 | |end=6580515 | ||
| Line 27: | Line 27: | ||
|start_of_center_position=6580489 | |start_of_center_position=6580489 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000663449.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103711.1 | |tss_id=hg_103711.1 | ||
Revision as of 17:33, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6580489 |
|---|---|
| End of the center position in the TSS region: | 6580490 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000663449.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000663449.1:0 AY007155:24 ENST00000455810.5:-40 NR_036502:-40 NR_036503:-40 ENST00000667809.1:41 ENST00000445427.1:-46 ENST00000613651.2:47 LP895775:-66 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NR_036502 |
| Entrez ID: | 439949 |
| Nearest Unigene: | Hs.13262 |
| Nearest Refseq: | NR_036502 |
| Nearest Ensembl: | |
| Gene Name: | PRKCQ antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | PRKCQ antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.125 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
