Difference between revisions of "TSS:Hg 103768.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|ATP5CL1= | |ATP5CL1= | ||
| − | |all_trans=ENST00000460362.5:0 ENST00000335698.4:0 ENST00000465936.5:0 ENST00000460820.6:0 | + | |all_trans=ENST00000460362.5:0 ENST00000356708.12:0 ENST00000335698.4:0 ENST00000465936.5:0 ENST00000460820.6:0 NM_001001973:0 BC020824:0 AK292896:0 AK296803:0 D16562:0 D16563:0 BC016812:0 AK129907:0 AK294061:0 BC010380:0 BC000470:1 BC013394:1 BC013865:3 ENST00000462760.1:-4 BC000931:-7 ENST00000493053.5:-16 CU677727:19 HQ448142:19 KJ890734:19 KJ896474:19 CR457403:20 ENST00000472202.1:22 LF383674:-33 MA619251:-33 BC026049:41 NM_005174:-59 NM_001320886:-59 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-2 |
|end=7788188 | |end=7788188 | ||
|end_of_center_position=7788176 | |end_of_center_position=7788176 | ||
|entrez_id=509 | |entrez_id=509 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=ATP5C | + | |gene_alias=ATP5C{{!}}ATP5C1{{!}}ATP5CL1 |
| − | |gene_description= | + | |gene_description=ATP synthase F1 subunit gamma |
|gene_id=509 | |gene_id=509 | ||
| − | |gene_name= | + | |gene_name=ATP synthase F1 subunit gamma |
|gene_source=HGNC:833 | |gene_source=HGNC:833 | ||
| − | |gene_symbol= | + | |gene_symbol=ATP5F1C |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:833 | |hgnc_mgi_id=HGNC:833 | ||
|nearest_ensembl=ENSG00000165629 | |nearest_ensembl=ENSG00000165629 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001001973 |
|nearest_refseq=NM_005174 | |nearest_refseq=NM_005174 | ||
|nearest_unigene=Hs.271135 | |nearest_unigene=Hs.271135 | ||
| − | |num_trans= | + | |num_trans=32 |
|species=human | |species=human | ||
|start=7788162 | |start=7788162 | ||
|start_of_center_position=7788175 | |start_of_center_position=7788175 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000460362.5 ENST00000335698.4 ENST00000465936.5 ENST00000460820.6 | + | |transcript_name=ENST00000460362.5 ENST00000356708.12 ENST00000335698.4 ENST00000465936.5 ENST00000460820.6 NM_001001973 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK129907 AK294061 BC010380 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103768.1 | |tss_id=hg_103768.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DFE6 B4DL14 P36542 | + | |uniprot_id=B4DFE6 B4DL14 P36542 Q8TAS0 |
}} | }} | ||
Revision as of 17:34, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7788175 |
|---|---|
| End of the center position in the TSS region: | 7788176 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000460362.5 ENST00000356708.12 ENST00000335698.4 ENST00000465936.5 ENST00000460820.6 NM_001001973 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK129907 AK294061 BC010380 |
|---|---|
| Distance: | 0 |
| Num_trans: | 32 |
| All_trans: | ENST00000460362.5:0 ENST00000356708.12:0 ENST00000335698.4:0 ENST00000465936.5:0 ENST00000460820.6:0 NM_001001973:0 BC020824:0 AK292896:0 AK296803:0 D16562:0 D16563:0 BC016812:0 AK129907:0 AK294061:0 BC010380:0 BC000470:1 BC013394:1 BC013865:3 ENST00000462760.1:-4 BC000931:-7 ENST00000493053.5:-16 CU677727:19 HQ448142:19 KJ890734:19 KJ896474:19 CR457403:20 ENST00000472202.1:22 LF383674:-33 MA619251:-33 BC026049:41 NM_005174:-59 NM_001320886:-59 |
TATA-Box annotation
| Distance to TSS: | -2 |
|---|---|
| Nearest PromoterID: | NM_001001973 |
| Entrez ID: | 509 |
| Nearest Unigene: | Hs.271135 |
| Nearest Refseq: | NM_005174 |
| Nearest Ensembl: | ENSG00000165629 |
| Gene Name: | ATP synthase F1 subunit gamma |
| Gene Alias: | ATP5C|ATP5C1|ATP5CL1 |
| Gene Description: | ATP synthase F1 subunit gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
