Difference between revisions of "TSS:Hg 103770.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TAFII-140= | |TAFII-140= | ||
|TAFII140= | |TAFII140= | ||
| − | |all_trans=ENST00000344293. | + | |all_trans=ENST00000344293.6:0 NM_031923:0 BC105593:0 BC073884:0 BC017320:0 BC045106:0 AK307657:0 AK307521:0 BC062352:4 BC028077:13 AJ292190:176 BC172366:176 AL117661:249 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=11 |
|end=7818534 | |end=7818534 | ||
|end_of_center_position=7818516 | |end_of_center_position=7818516 | ||
|entrez_id=83860 | |entrez_id=83860 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=TAF140 | + | |gene_alias=TAF140{{!}}TAFII-140{{!}}TAFII140 |
|gene_description=TATA-box binding protein associated factor 3 | |gene_description=TATA-box binding protein associated factor 3 | ||
|gene_id=83860 | |gene_id=83860 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_031923 | |nearest_refseq=NM_031923 | ||
|nearest_unigene=Hs.527688 | |nearest_unigene=Hs.527688 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=7818497 | |start=7818497 | ||
|start_of_center_position=7818515 | |start_of_center_position=7818515 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000344293. | + | |transcript_name=ENST00000344293.6 NM_031923 BC105593 BC073884 BC017320 BC045106 AK307657 AK307521 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103770.1 | |tss_id=hg_103770.1 | ||
Revision as of 17:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 7818515 |
|---|---|
| End of the center position in the TSS region: | 7818516 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000344293.6 NM_031923 BC105593 BC073884 BC017320 BC045106 AK307657 AK307521 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000344293.6:0 NM_031923:0 BC105593:0 BC073884:0 BC017320:0 BC045106:0 AK307657:0 AK307521:0 BC062352:4 BC028077:13 AJ292190:176 BC172366:176 AL117661:249 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NM_031923 |
| Entrez ID: | 83860 |
| Nearest Unigene: | Hs.527688 |
| Nearest Refseq: | NM_031923 |
| Nearest Ensembl: | ENSG00000165632 |
| Gene Name: | TATA-box binding protein associated factor 3 |
| Gene Alias: | TAF140|TAFII-140|TAFII140 |
| Gene Description: | TATA-box binding protein associated factor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
