Difference between revisions of "TSS:Hg 103905.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|CMT2Q= | |CMT2Q= | ||
| − | |all_trans= | + | |all_trans=ENST00000263035.9:13 NM_018706:13 BC002477:31 BC007955:49 AB046850:57 AK309810:68 ENST00000437298.1:83 CU675875:92 KJ899148:92 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=13 |
| − | |distance_to_tss= | + | |distance_to_tss=-18 |
|end=12068941 | |end=12068941 | ||
|end_of_center_position=12068936 | |end_of_center_position=12068936 | ||
|entrez_id=55526 | |entrez_id=55526 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=AMOXAD | + | |gene_alias=AMOXAD{{!}}CMT2Q |
|gene_description=dehydrogenase E1 and transketolase domain containing 1 | |gene_description=dehydrogenase E1 and transketolase domain containing 1 | ||
|gene_id=55526 | |gene_id=55526 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_018706 | |nearest_refseq=NM_018706 | ||
|nearest_unigene=Hs.104980 | |nearest_unigene=Hs.104980 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=12068930 | |start=12068930 | ||
|start_of_center_position=12068935 | |start_of_center_position=12068935 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_018706 | + | |transcript_name=ENST00000263035.9 NM_018706 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103905.1 | |tss_id=hg_103905.1 | ||
Revision as of 17:37, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 12068935 |
|---|---|
| End of the center position in the TSS region: | 12068936 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000263035.9 NM_018706 |
|---|---|
| Distance: | 13 |
| Num_trans: | 9 |
| All_trans: | ENST00000263035.9:13 NM_018706:13 BC002477:31 BC007955:49 AB046850:57 AK309810:68 ENST00000437298.1:83 CU675875:92 KJ899148:92 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_018706 |
| Entrez ID: | 55526 |
| Nearest Unigene: | Hs.104980 |
| Nearest Refseq: | NM_018706 |
| Nearest Ensembl: | ENSG00000181192 |
| Gene Name: | dehydrogenase E1 and transketolase domain containing 1 |
| Gene Alias: | AMOXAD|CMT2Q |
| Gene Description: | dehydrogenase E1 and transketolase domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
