Difference between revisions of "TSS:Hg 103912.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|D123= | |D123= | ||
| − | |all_trans=ENST00000429258.6 | + | |all_trans=ENST00000429258.6:0 D14878:0 AK225634:13 ENST00000455773.7:147 U27112:201 ENST00000281141.9:205 NM_006023:205 AK308790:205 ENST00000467016.1:213 BC009598:214 BC001600:229 ENST00000378900.6:240 AK289362:242 ENST00000442050.5:249 CR456966:263 KJ892641:263 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-63 |
|end=12195983 | |end=12195983 | ||
|end_of_center_position=12195955 | |end_of_center_position=12195955 | ||
| − | |entrez_id= | + | |entrez_id=11164 |
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias= | + | |gene_alias=YSA1{{!}}YSA1H{{!}}YSAH1{{!}}hNUDT5 |
| − | |gene_description= | + | |gene_description=nudix hydrolase 5 |
|gene_id=8872 | |gene_id=8872 | ||
|gene_name=cell division cycle 123 | |gene_name=cell division cycle 123 | ||
| Line 19: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:16827 | |hgnc_mgi_id=HGNC:16827 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000165609 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_014142 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_014142 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.555956 |
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=12195925 | |start=12195925 | ||
|start_of_center_position=12195954 | |start_of_center_position=12195954 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000429258.6 | + | |transcript_name=ENST00000429258.6 D14878 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103912.1 | |tss_id=hg_103912.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=X6RKY7 |
}} | }} | ||
Revision as of 17:38, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12195954 |
|---|---|
| End of the center position in the TSS region: | 12195955 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000429258.6 D14878 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000429258.6:0 D14878:0 AK225634:13 ENST00000455773.7:147 U27112:201 ENST00000281141.9:205 NM_006023:205 AK308790:205 ENST00000467016.1:213 BC009598:214 BC001600:229 ENST00000378900.6:240 AK289362:242 ENST00000442050.5:249 CR456966:263 KJ892641:263 |
TATA-Box annotation
| Distance to TSS: | -63 |
|---|---|
| Nearest PromoterID: | NM_014142 |
| Entrez ID: | 11164 |
| Nearest Unigene: | Hs.555956 |
| Nearest Refseq: | NM_014142 |
| Nearest Ensembl: | ENSG00000165609 |
| Gene Name: | cell division cycle 123 |
| Gene Alias: | YSA1|YSA1H|YSAH1|hNUDT5 |
| Gene Description: | nudix hydrolase 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
