Difference between revisions of "TSS:Hg 103933.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000263036.9 | + | |all_trans=ENST00000263036.9:0 AK055403:0 ENST00000378764.6:146 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=540 |
|end=13099457 | |end=13099457 | ||
|end_of_center_position=13099450 | |end_of_center_position=13099450 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_031455 | |nearest_refseq=NM_031455 | ||
|nearest_unigene=Hs.498720 | |nearest_unigene=Hs.498720 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=13099441 | |start=13099441 | ||
|start_of_center_position=13099449 | |start_of_center_position=13099449 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000263036.9 | + | |transcript_name=ENST00000263036.9 AK055403 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103933.1 | |tss_id=hg_103933.1 | ||
Revision as of 17:38, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 13099449 |
|---|---|
| End of the center position in the TSS region: | 13099450 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000263036.9 AK055403 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000263036.9:0 AK055403:0 ENST00000378764.6:146 |
TATA-Box annotation
| Distance to TSS: | 540 |
|---|---|
| Nearest PromoterID: | NM_001282658 |
| Entrez ID: | 83643 |
| Nearest Unigene: | Hs.498720 |
| Nearest Refseq: | NM_031455 |
| Nearest Ensembl: | ENSG00000151468 |
| Gene Name: | optineurin |
| Gene Alias: | - |
| Gene Description: | coiled-coil domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
