Difference between revisions of "TSS:Hg 103980.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HSP70L1= | |HSP70L1= | ||
| − | |all_trans= | + | |all_trans=BC108738:49 ENST00000645667.1:125 ENST00000640019.3:129 ENST00000378372.8:129 NM_001378785:129 NM_016299:129 NM_001378790:129 AK302452:139 AK225265:139 AK225651:139 AK000880:142 BC065281:152 BC038845:153 ENST00000493178.1:154 BC119690:164 BC119691:164 AF112210:164 AF143723:173 AK292323:175 KJ902567:225 AB528152:225 AB587406:225 KJ893846:225 ENST00000441647.1:260 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| − | |distance= | + | |distance=49 |
|distance_to_tss=8 | |distance_to_tss=8 | ||
|end=14838177 | |end=14838177 | ||
| Line 10: | Line 10: | ||
|entrez_id=51182 | |entrez_id=51182 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=HSP70-4 | + | |gene_alias=HSP70-4{{!}}HSP70L1 |
|gene_description=heat shock protein family A (Hsp70) member 14 | |gene_description=heat shock protein family A (Hsp70) member 14 | ||
|gene_id=51182 | |gene_id=51182 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:29526 | |hgnc_mgi_id=HGNC:29526 | ||
|nearest_ensembl=ENSG00000187522 | |nearest_ensembl=ENSG00000187522 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001278205 |
|nearest_refseq=NM_016299 | |nearest_refseq=NM_016299 | ||
|nearest_unigene=Hs.534169 | |nearest_unigene=Hs.534169 | ||
| − | |num_trans= | + | |num_trans=24 |
|species=human | |species=human | ||
|start=14838158 | |start=14838158 | ||
|start_of_center_position=14838167 | |start_of_center_position=14838167 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC108738 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103980.1 | |tss_id=hg_103980.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:39, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 14838167 |
|---|---|
| End of the center position in the TSS region: | 14838168 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC108738 |
|---|---|
| Distance: | 49 |
| Num_trans: | 24 |
| All_trans: | BC108738:49 ENST00000645667.1:125 ENST00000640019.3:129 ENST00000378372.8:129 NM_001378785:129 NM_016299:129 NM_001378790:129 AK302452:139 AK225265:139 AK225651:139 AK000880:142 BC065281:152 BC038845:153 ENST00000493178.1:154 BC119690:164 BC119691:164 AF112210:164 AF143723:173 AK292323:175 KJ902567:225 AB528152:225 AB587406:225 KJ893846:225 ENST00000441647.1:260 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_001278205 |
| Entrez ID: | 51182 |
| Nearest Unigene: | Hs.534169 |
| Nearest Refseq: | NM_016299 |
| Nearest Ensembl: | ENSG00000187522 |
| Gene Name: | heat shock protein family A (Hsp70) member 14 |
| Gene Alias: | HSP70-4|HSP70L1 |
| Gene Description: | heat shock protein family A (Hsp70) member 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
