Difference between revisions of "TSS:Hg 103983.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|HSP70L1= | |HSP70L1= | ||
| − | |all_trans= | + | |all_trans=ENST00000645667.1:22 ENST00000640019.3:26 ENST00000378372.8:26 NM_001378785:26 NM_016299:26 NM_001378790:26 BC108738:-34 AK302452:36 AK225265:36 AK225651:36 AK000880:39 BC065281:49 BC038845:50 ENST00000493178.1:51 BC119690:61 BC119691:61 AF112210:61 AF143723:70 AK292323:72 KJ902567:122 AB528152:122 AB587406:122 KJ893846:122 ENST00000441647.1:157 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=22 | |distance=22 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-36 |
|end=14838280 | |end=14838280 | ||
|end_of_center_position=14838270 | |end_of_center_position=14838270 | ||
|entrez_id=51182 | |entrez_id=51182 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=HSP70-4 | + | |gene_alias=HSP70-4{{!}}HSP70L1 |
|gene_description=heat shock protein family A (Hsp70) member 14 | |gene_description=heat shock protein family A (Hsp70) member 14 | ||
| − | |gene_id= | + | |gene_id=100421372 |
| − | |gene_name= | + | |gene_name=zinc finger and SCAN domain containing 29 |
| − | |gene_source= | + | |gene_source=EntrezGene:100421372 |
| − | |gene_symbol= | + | |gene_symbol=LOC100421372 |
| − | |gene_synonyms= | + | |gene_synonyms= |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id= |
|nearest_ensembl=ENSG00000187522 | |nearest_ensembl=ENSG00000187522 | ||
|nearest_promoter_id=NR_103464 | |nearest_promoter_id=NR_103464 | ||
|nearest_refseq=NM_016299 | |nearest_refseq=NM_016299 | ||
|nearest_unigene=Hs.534169 | |nearest_unigene=Hs.534169 | ||
| − | |num_trans= | + | |num_trans=24 |
|species=human | |species=human | ||
|start=14838259 | |start=14838259 | ||
|start_of_center_position=14838269 | |start_of_center_position=14838269 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000645667.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103983.1 | |tss_id=hg_103983.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14838269 |
|---|---|
| End of the center position in the TSS region: | 14838270 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645667.1 |
|---|---|
| Distance: | 22 |
| Num_trans: | 24 |
| All_trans: | ENST00000645667.1:22 ENST00000640019.3:26 ENST00000378372.8:26 NM_001378785:26 NM_016299:26 NM_001378790:26 BC108738:-34 AK302452:36 AK225265:36 AK225651:36 AK000880:39 BC065281:49 BC038845:50 ENST00000493178.1:51 BC119690:61 BC119691:61 AF112210:61 AF143723:70 AK292323:72 KJ902567:122 AB528152:122 AB587406:122 KJ893846:122 ENST00000441647.1:157 |
TATA-Box annotation
| Distance to TSS: | -36 |
|---|---|
| Nearest PromoterID: | NR_103464 |
| Entrez ID: | 51182 |
| Nearest Unigene: | Hs.534169 |
| Nearest Refseq: | NM_016299 |
| Nearest Ensembl: | ENSG00000187522 |
| Gene Name: | zinc finger and SCAN domain containing 29 |
| Gene Alias: | HSP70-4|HSP70L1 |
| Gene Description: | heat shock protein family A (Hsp70) member 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
