Difference between revisions of "TSS:Hg 103984.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|HSP70L1= | |HSP70L1= | ||
| − | |all_trans= | + | |all_trans=ENST00000645667.1:0 ENST00000640019.3:0 ENST00000378372.8:0 ENST00000493178.1:0 NM_001378785:0 NM_016299:0 NM_001378790:0 AK302452:0 AK225265:0 AK225651:0 AK000880:0 BC065281:0 BC038845:0 BC119690:0 BC119691:0 AF112210:0 AF143723:4 AK292323:6 KJ902567:56 AB528152:56 AB587406:56 KJ893846:56 BC108738:-63 ENST00000441647.1:91 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=11 |
|end=14838346 | |end=14838346 | ||
|end_of_center_position=14838318 | |end_of_center_position=14838318 | ||
|entrez_id=51182 | |entrez_id=51182 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
| − | |gene_alias=HSP70-4 | + | |gene_alias=HSP70-4{{!}}HSP70L1 |
|gene_description=heat shock protein family A (Hsp70) member 14 | |gene_description=heat shock protein family A (Hsp70) member 14 | ||
|gene_id=51182 | |gene_id=51182 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:29526 | |hgnc_mgi_id=HGNC:29526 | ||
|nearest_ensembl=ENSG00000187522 | |nearest_ensembl=ENSG00000187522 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_016299 |
|nearest_refseq=NM_016299 | |nearest_refseq=NM_016299 | ||
|nearest_unigene=Hs.534169 | |nearest_unigene=Hs.534169 | ||
| − | |num_trans= | + | |num_trans=24 |
|species=human | |species=human | ||
|start=14838288 | |start=14838288 | ||
|start_of_center_position=14838317 | |start_of_center_position=14838317 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000645667.1 ENST00000640019.3 ENST00000378372.8 ENST00000493178.1 NM_001378785 NM_016299 NM_001378790 AK302452 AK225265 AK225651 AK000880 BC065281 BC038845 BC119690 BC119691 AF112210 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103984.1 | |tss_id=hg_103984.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A6NJU0 | + | |uniprot_id=A6NJU0 B4DYI5 Q0VDF9 |
}} | }} | ||
Revision as of 17:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 14838317 |
|---|---|
| End of the center position in the TSS region: | 14838318 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000645667.1 ENST00000640019.3 ENST00000378372.8 ENST00000493178.1 NM_001378785 NM_016299 NM_001378790 AK302452 AK225265 AK225651 AK000880 BC065281 BC038845 BC119690 BC119691 AF112210 |
|---|---|
| Distance: | 0 |
| Num_trans: | 24 |
| All_trans: | ENST00000645667.1:0 ENST00000640019.3:0 ENST00000378372.8:0 ENST00000493178.1:0 NM_001378785:0 NM_016299:0 NM_001378790:0 AK302452:0 AK225265:0 AK225651:0 AK000880:0 BC065281:0 BC038845:0 BC119690:0 BC119691:0 AF112210:0 AF143723:4 AK292323:6 KJ902567:56 AB528152:56 AB587406:56 KJ893846:56 BC108738:-63 ENST00000441647.1:91 |
TATA-Box annotation
| Distance to TSS: | 11 |
|---|---|
| Nearest PromoterID: | NM_016299 |
| Entrez ID: | 51182 |
| Nearest Unigene: | Hs.534169 |
| Nearest Refseq: | NM_016299 |
| Nearest Ensembl: | ENSG00000187522 |
| Gene Name: | heat shock protein family A (Hsp70) member 14 |
| Gene Alias: | HSP70-4|HSP70L1 |
| Gene Description: | heat shock protein family A (Hsp70) member 14 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
