Difference between revisions of "TSS:Hg 103988.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000433779.5:0 ENST00000378325.7:0 NM_001193427:0 NM_001193425:0 | + | |all_trans=ENST00000433779.5:0 ENST00000378325.7:0 ENST00000354919.11:0 NM_001193427:0 NM_001193425:0 NM_001193424:0 BC029360:0 AK222565:0 AK225369:0 AK027067:0 CU688630:2 KJ894721:2 ENST00000313519.9:13 NM_024670:13 BC007754:13 ENST00000378331.5:-25 ENST00000420416.1:35 NR_034181:-62 NM_001193426:-62 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:17287 | |hgnc_mgi_id=HGNC:17287 | ||
|nearest_ensembl=ENSG00000152455 | |nearest_ensembl=ENSG00000152455 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001193427 |
|nearest_refseq=NM_024670 | |nearest_refseq=NM_024670 | ||
|nearest_unigene=Hs.554883 | |nearest_unigene=Hs.554883 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=14878844 | |start=14878844 | ||
|start_of_center_position=14878865 | |start_of_center_position=14878865 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000433779.5 ENST00000378325.7 NM_001193427 NM_001193425 | + | |transcript_name=ENST00000433779.5 ENST00000378325.7 ENST00000354919.11 NM_001193427 NM_001193425 NM_001193424 BC029360 AK222565 AK225369 AK027067 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103988.1 | |tss_id=hg_103988.1 | ||
Revision as of 17:39, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 14878865 |
|---|---|
| End of the center position in the TSS region: | 14878866 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000433779.5 ENST00000378325.7 ENST00000354919.11 NM_001193427 NM_001193425 NM_001193424 BC029360 AK222565 AK225369 AK027067 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000433779.5:0 ENST00000378325.7:0 ENST00000354919.11:0 NM_001193427:0 NM_001193425:0 NM_001193424:0 BC029360:0 AK222565:0 AK225369:0 AK027067:0 CU688630:2 KJ894721:2 ENST00000313519.9:13 NM_024670:13 BC007754:13 ENST00000378331.5:-25 ENST00000420416.1:35 NR_034181:-62 NM_001193426:-62 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001193427 |
| Entrez ID: | 79723 |
| Nearest Unigene: | Hs.554883 |
| Nearest Refseq: | NM_024670 |
| Nearest Ensembl: | ENSG00000152455 |
| Gene Name: | suppressor of variegation 3-9 homolog 2 |
| Gene Alias: | KMT1B |
| Gene Description: | suppressor of variegation 3-9 homolog 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
