Difference between revisions of "TSS:Hg 104005.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AF079567:-125 ENST00000441850 | + | |all_trans=AF079567:-125 ENST00000441850.1:-329 BC029494:-350 U77664:-364 AK057006:-367 ENST00000378197.5:-394 NM_183005:-394 NM_001097590:-394 NM_006414:-394 ENST00000378202.5:-418 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance=-125 | |distance=-125 | ||
| − | |distance_to_tss= | + | |distance_to_tss=411 |
|end=15097783 | |end=15097783 | ||
|end_of_center_position=15097766 | |end_of_center_position=15097766 | ||
| − | |entrez_id= | + | |entrez_id=10557 |
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=ribonuclease P/MRP subunit p38 |
|gene_id=10557 | |gene_id=10557 | ||
| − | |gene_name=ribonuclease P/MRP | + | |gene_name=ribonuclease P/MRP subunit p38 |
|gene_source=HGNC:30329 | |gene_source=HGNC:30329 | ||
|gene_symbol=RPP38 | |gene_symbol=RPP38 | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:30329 | |hgnc_mgi_id=HGNC:30329 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000152464 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_006414 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_006414 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.94986 |
|num_trans=10 | |num_trans=10 | ||
|species=human | |species=human | ||
Revision as of 17:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 15097765 |
|---|---|
| End of the center position in the TSS region: | 15097766 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF079567 |
|---|---|
| Distance: | -125 |
| Num_trans: | 10 |
| All_trans: | AF079567:-125 ENST00000441850.1:-329 BC029494:-350 U77664:-364 AK057006:-367 ENST00000378197.5:-394 NM_183005:-394 NM_001097590:-394 NM_006414:-394 ENST00000378202.5:-418 |
TATA-Box annotation
| Distance to TSS: | 411 |
|---|---|
| Nearest PromoterID: | NM_006414 |
| Entrez ID: | 10557 |
| Nearest Unigene: | Hs.94986 |
| Nearest Refseq: | NM_006414 |
| Nearest Ensembl: | ENSG00000152464 |
| Gene Name: | ribonuclease P/MRP subunit p38 |
| Gene Alias: | - |
| Gene Description: | ribonuclease P/MRP subunit p38 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
