Difference between revisions of "TSS:Hg 104011.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|RPR-1= | |RPR-1= | ||
| − | |all_trans=ENST00000411224 | + | |all_trans=ENST00000411224.1:-2 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 10: | Line 10: | ||
|entrez_id=9317 | |entrez_id=9317 | ||
|gc_percent=0.268657 | |gc_percent=0.268657 | ||
| − | |gene_alias=HPHRP | + | |gene_alias=HPHRP{{!}}RPR-1 |
|gene_description=phosphotriesterase related | |gene_description=phosphotriesterase related | ||
|gene_id= | |gene_id= | ||
| − | |gene_name= | + | |gene_name=RNA, U2 small nuclear 18, pseudogene |
|gene_source=HGNC:48511 | |gene_source=HGNC:48511 | ||
|gene_symbol=RNU2-18P | |gene_symbol=RNU2-18P | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:48511 | |hgnc_mgi_id=HGNC:48511 | ||
|nearest_ensembl=ENSG00000165983 | |nearest_ensembl=ENSG00000165983 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001261837 |
|nearest_refseq=NM_030664 | |nearest_refseq=NM_030664 | ||
|nearest_unigene=Hs.444321 | |nearest_unigene=Hs.444321 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=16476004 | |start=16476004 | ||
|start_of_center_position=16476005 | |start_of_center_position=16476005 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000411224 | + | |transcript_name=ENST00000411224.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104011.1 | |tss_id=hg_104011.1 | ||
Revision as of 17:40, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 16476005 |
|---|---|
| End of the center position in the TSS region: | 16476006 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000411224.1 |
|---|---|
| Distance: | -2 |
| Num_trans: | 1 |
| All_trans: | ENST00000411224.1:-2 |
TATA-Box annotation
| Distance to TSS: | 39062 |
|---|---|
| Nearest PromoterID: | NM_001261837 |
| Entrez ID: | 9317 |
| Nearest Unigene: | Hs.444321 |
| Nearest Refseq: | NM_030664 |
| Nearest Ensembl: | ENSG00000165983 |
| Gene Name: | RNA, U2 small nuclear 18, pseudogene |
| Gene Alias: | HPHRP|RPR-1 |
| Gene Description: | phosphotriesterase related |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.268657 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
