Difference between revisions of "TSS:Hg 104098.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|STAM1= | |STAM1= | ||
| − | |all_trans=ENST00000445846.1:0 ENST00000377500 | + | |all_trans=ENST00000445846.1:0 ENST00000377500.1:0 BC030586:-13 AK314405:20 ENST00000377524.8:-44 NM_001324288:-44 NM_001324282:-44 NM_001324285:-44 NM_001324284:-44 NM_001324283:-44 NM_003473:-44 NM_001324286:-44 NM_001324287:-44 NM_001324289:-44 AK303083:44 U43899:77 CU688920:119 KJ901858:119 AB590764:119 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=57 |
|end=17644221 | |end=17644221 | ||
|end_of_center_position=17644208 | |end_of_center_position=17644208 | ||
|entrez_id=8027 | |entrez_id=8027 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=STAM-1 | + | |gene_alias=STAM-1{{!}}STAM1 |
|gene_description=signal transducing adaptor molecule | |gene_description=signal transducing adaptor molecule | ||
|gene_id=8027 | |gene_id=8027 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:11357 | |hgnc_mgi_id=HGNC:11357 | ||
|nearest_ensembl=ENSG00000136738 | |nearest_ensembl=ENSG00000136738 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001324283 |
|nearest_refseq=NM_003473 | |nearest_refseq=NM_003473 | ||
|nearest_unigene=Hs.335391 | |nearest_unigene=Hs.335391 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=17644194 | |start=17644194 | ||
|start_of_center_position=17644207 | |start_of_center_position=17644207 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000445846.1 ENST00000377500 | + | |transcript_name=ENST00000445846.1 ENST00000377500.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104098.1 | |tss_id=hg_104098.1 | ||
Revision as of 17:42, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 17644207 |
|---|---|
| End of the center position in the TSS region: | 17644208 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000445846.1 ENST00000377500.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000445846.1:0 ENST00000377500.1:0 BC030586:-13 AK314405:20 ENST00000377524.8:-44 NM_001324288:-44 NM_001324282:-44 NM_001324285:-44 NM_001324284:-44 NM_001324283:-44 NM_003473:-44 NM_001324286:-44 NM_001324287:-44 NM_001324289:-44 AK303083:44 U43899:77 CU688920:119 KJ901858:119 AB590764:119 |
TATA-Box annotation
| Distance to TSS: | 57 |
|---|---|
| Nearest PromoterID: | NM_001324283 |
| Entrez ID: | 8027 |
| Nearest Unigene: | Hs.335391 |
| Nearest Refseq: | NM_003473 |
| Nearest Ensembl: | ENSG00000136738 |
| Gene Name: | signal transducing adaptor molecule |
| Gene Alias: | STAM-1|STAM1 |
| Gene Description: | signal transducing adaptor molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
