Difference between revisions of "TSS:Hg 104106.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ZIP-12= | |ZIP-12= | ||
| − | |all_trans=ENST00000539911.5 | + | |all_trans=ENST00000539911.5:8 NM_001282734:8 NM_152725:8 NM_001282733:8 ENST00000377374.8:61 AK055061:61 ENST00000377371.3:83 BC035118:83 ENST00000377369.7:87 NM_001145195:87 BC047635:96 AK295294:132 BC094700:132 |
|bA570F3.1= | |bA570F3.1= | ||
|chr=chr10 | |chr=chr10 | ||
| Line 11: | Line 11: | ||
|entrez_id=221074 | |entrez_id=221074 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=LZT-Hs8 | + | |gene_alias=LZT-Hs8{{!}}ZIP-12{{!}}bA570F3.1 |
|gene_description=solute carrier family 39 member 12 | |gene_description=solute carrier family 39 member 12 | ||
|gene_id=221074 | |gene_id=221074 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:20860 | |hgnc_mgi_id=HGNC:20860 | ||
|nearest_ensembl=ENSG00000148482 | |nearest_ensembl=ENSG00000148482 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_152725 |
|nearest_refseq=NM_152725 | |nearest_refseq=NM_152725 | ||
|nearest_unigene=Hs.350895 | |nearest_unigene=Hs.350895 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=17951824 | |start=17951824 | ||
|start_of_center_position=17951827 | |start_of_center_position=17951827 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000539911.5 | + | |transcript_name=ENST00000539911.5 NM_001282734 NM_152725 NM_001282733 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104106.1 | |tss_id=hg_104106.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q504Y0 |
}} | }} | ||
Revision as of 17:42, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17951827 |
|---|---|
| End of the center position in the TSS region: | 17951828 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000539911.5 NM_001282734 NM_152725 NM_001282733 |
|---|---|
| Distance: | 8 |
| Num_trans: | 13 |
| All_trans: | ENST00000539911.5:8 NM_001282734:8 NM_152725:8 NM_001282733:8 ENST00000377374.8:61 AK055061:61 ENST00000377371.3:83 BC035118:83 ENST00000377369.7:87 NM_001145195:87 BC047635:96 AK295294:132 BC094700:132 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_152725 |
| Entrez ID: | 221074 |
| Nearest Unigene: | Hs.350895 |
| Nearest Refseq: | NM_152725 |
| Nearest Ensembl: | ENSG00000148482 |
| Gene Name: | solute carrier family 39 member 12 |
| Gene Alias: | LZT-Hs8|ZIP-12|bA570F3.1 |
| Gene Description: | solute carrier family 39 member 12 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
