Difference between revisions of "TSS:Hg 104138.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CAVB2= | |CAVB2= | ||
|MYSB= | |MYSB= | ||
| − | |all_trans=AK293937:7 AF423192:16 | + | |all_trans=AK293937:7 AF423192:16 ENST00000651928.1:-296 ENST00000652478.1:-314 ENST00000643330.1:-316 AK295113:-316 AK299873:-321 ENST00000647168.2:-327 ENST00000651330.1:-327 ENST00000650685.1:-369 ENST00000377315.5:-428 NM_201570:-428 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=7 | |distance=7 | ||
| − | |distance_to_tss= | + | |distance_to_tss=434 |
|end=18401016 | |end=18401016 | ||
|end_of_center_position=18401010 | |end_of_center_position=18401010 | ||
|entrez_id=783 | |entrez_id=783 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=CACNLB2 | + | |gene_alias=CACNLB2{{!}}CAVB2{{!}}MYSB |
|gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | |gene_description=calcium voltage-gated channel auxiliary subunit beta 2 | ||
|gene_id=783 | |gene_id=783 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_000724 | |nearest_refseq=NM_000724 | ||
|nearest_unigene=Hs.59093 | |nearest_unigene=Hs.59093 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=18401002 | |start=18401002 | ||
Revision as of 17:43, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 18401009 |
|---|---|
| End of the center position in the TSS region: | 18401010 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK293937 |
|---|---|
| Distance: | 7 |
| Num_trans: | 12 |
| All_trans: | AK293937:7 AF423192:16 ENST00000651928.1:-296 ENST00000652478.1:-314 ENST00000643330.1:-316 AK295113:-316 AK299873:-321 ENST00000647168.2:-327 ENST00000651330.1:-327 ENST00000650685.1:-369 ENST00000377315.5:-428 NM_201570:-428 |
TATA-Box annotation
| Distance to TSS: | 434 |
|---|---|
| Nearest PromoterID: | NM_201570 |
| Entrez ID: | 783 |
| Nearest Unigene: | Hs.59093 |
| Nearest Refseq: | NM_000724 |
| Nearest Ensembl: | ENSG00000165995 |
| Gene Name: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Alias: | CACNLB2|CAVB2|MYSB |
| Gene Description: | calcium voltage-gated channel auxiliary subunit beta 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
