Difference between revisions of "TSS:Hg 104172.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC012885:-69 AF378757:161 CU680430:167 KJ903482:167 | + | |all_trans=BC012885:-69 AF378757:161 CU680430:167 KJ903482:167 AY358486:-463 AK304591:-469 ENST00000377252.5:-474 NM_032812:-474 NM_001282736:-474 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=-69 | |distance=-69 | ||
| − | |distance_to_tss= | + | |distance_to_tss=476 |
|end=19816910 | |end=19816910 | ||
|end_of_center_position=19816908 | |end_of_center_position=19816908 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:21013 | |hgnc_mgi_id=HGNC:21013 | ||
|nearest_ensembl=ENSG00000120594 | |nearest_ensembl=ENSG00000120594 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001282736 |
|nearest_refseq=NM_032812 | |nearest_refseq=NM_032812 | ||
|nearest_unigene=Hs.99472 | |nearest_unigene=Hs.99472 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=19816905 | |start=19816905 | ||
Revision as of 17:44, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 19816907 |
|---|---|
| End of the center position in the TSS region: | 19816908 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC012885 |
|---|---|
| Distance: | -69 |
| Num_trans: | 9 |
| All_trans: | BC012885:-69 AF378757:161 CU680430:167 KJ903482:167 AY358486:-463 AK304591:-469 ENST00000377252.5:-474 NM_032812:-474 NM_001282736:-474 |
TATA-Box annotation
| Distance to TSS: | 476 |
|---|---|
| Nearest PromoterID: | NM_001282736 |
| Entrez ID: | 84898 |
| Nearest Unigene: | Hs.99472 |
| Nearest Refseq: | NM_032812 |
| Nearest Ensembl: | ENSG00000120594 |
| Gene Name: | plexin domain containing 2 |
| Gene Alias: | TEM7R |
| Gene Description: | plexin domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
