Difference between revisions of "TSS:Hg 197423.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ZNF348= | |ZNF348= | ||
| − | |all_trans=ENST00000326624.2:22 | + | |all_trans=ENST00000326624.2:22 BC042753:22 BX538016:68 ENST00000557385.2:82 NM_001184742:82 NM_006777:82 AL833604:82 AK312321:84 BX538101:96 |
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=22 | |distance=22 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-91 |
|end=120250730 | |end=120250730 | ||
|end_of_center_position=120250721 | |end_of_center_position=120250721 | ||
|entrez_id=10009 | |entrez_id=10009 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=ZNF-kaiso | + | |gene_alias=ZNF-kaiso{{!}}ZNF348 |
|gene_description=zinc finger and BTB domain containing 33 | |gene_description=zinc finger and BTB domain containing 33 | ||
|gene_id=10009 | |gene_id=10009 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_006777 | |nearest_refseq=NM_006777 | ||
|nearest_unigene=Hs.143604 | |nearest_unigene=Hs.143604 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=120250711 | |start=120250711 | ||
|start_of_center_position=120250720 | |start_of_center_position=120250720 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000326624 | + | |transcript_name=ENST00000326624.2 BC042753 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_197423.1 | |tss_id=hg_197423.1 | ||
Revision as of 05:39, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120250720 |
|---|---|
| End of the center position in the TSS region: | 120250721 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000326624.2 BC042753 |
|---|---|
| Distance: | 22 |
| Num_trans: | 9 |
| All_trans: | ENST00000326624.2:22 BC042753:22 BX538016:68 ENST00000557385.2:82 NM_001184742:82 NM_006777:82 AL833604:82 AK312321:84 BX538101:96 |
TATA-Box annotation
| Distance to TSS: | -91 |
|---|---|
| Nearest PromoterID: | NM_006777 |
| Entrez ID: | 10009 |
| Nearest Unigene: | Hs.143604 |
| Nearest Refseq: | NM_006777 |
| Nearest Ensembl: | ENSG00000177485 |
| Gene Name: | zinc finger and BTB domain containing 33 |
| Gene Alias: | ZNF-kaiso|ZNF348 |
| Gene Description: | zinc finger and BTB domain containing 33 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
