Difference between revisions of "TSS:Hg 104208.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC032532:71 NM_004641:78 NM_001195630:78 NM_001195628:78 NM_001195627:78 NR_136736:78 ENST00000377100.8:138 ENST00000377072.8:138 ENST00000307729.12:138 NM_001195626:138 U13948:244 BC065376:249 BC080577:249 ENST00000377091.7:251 ENST00000650772.1:346 ENST00000651298.1:372 AB209755:372 ENST00000471315.5:374 BC052798:380 ENST00000652497.1:382 BC094844:383 BC129946:385 ENST00000495130.5:396 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.830846 | |gc_percent=0.830846 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
| − | |gene_description= | + | |gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_id=8028 | |gene_id=8028 | ||
| − | |gene_name= | + | |gene_name=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_source=HGNC:16063 | |gene_source=HGNC:16063 | ||
|gene_symbol=MLLT10 | |gene_symbol=MLLT10 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:16063 | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195626 |
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| − | |num_trans= | + | |num_trans=23 |
|species=human | |species=human | ||
|start=21534055 | |start=21534055 | ||
|start_of_center_position=21534074 | |start_of_center_position=21534074 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC032532 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104208.1 | |tss_id=hg_104208.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:45, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 21534074 |
|---|---|
| End of the center position in the TSS region: | 21534075 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC032532 |
|---|---|
| Distance: | 71 |
| Num_trans: | 23 |
| All_trans: | BC032532:71 NM_004641:78 NM_001195630:78 NM_001195628:78 NM_001195627:78 NR_136736:78 ENST00000377100.8:138 ENST00000377072.8:138 ENST00000307729.12:138 NM_001195626:138 U13948:244 BC065376:249 BC080577:249 ENST00000377091.7:251 ENST00000650772.1:346 ENST00000651298.1:372 AB209755:372 ENST00000471315.5:374 BC052798:380 ENST00000652497.1:382 BC094844:383 BC129946:385 ENST00000495130.5:396 |
TATA-Box annotation
| Distance to TSS: | -97 |
|---|---|
| Nearest PromoterID: | NM_001195626 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Alias: | AF10 |
| Gene Description: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
