Difference between revisions of "TSS:Hg 104210.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC032532:8 NM_004641:15 NM_001195630:15 NM_001195628:15 NM_001195627:15 NR_136736:15 ENST00000377100.8:75 ENST00000377072.8:75 ENST00000307729.12:75 NM_001195626:75 U13948:181 BC065376:186 BC080577:186 ENST00000377091.7:188 ENST00000650772.1:283 ENST00000651298.1:309 AB209755:309 ENST00000471315.5:311 BC052798:317 ENST00000652497.1:319 BC094844:320 BC129946:322 ENST00000495130.5:333 ENST00000621220.4:488 ENST00000377059.7:488 CU687346:488 KJ892460:488 BC156206:488 BC156949:488 AY598745:488 LF383675:488 MA619252:488 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=AF10 | |gene_alias=AF10 | ||
| − | |gene_description= | + | |gene_description=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_id=8028 | |gene_id=8028 | ||
| − | |gene_name= | + | |gene_name=MLLT10 histone lysine methyltransferase DOT1L cofactor |
|gene_source=HGNC:16063 | |gene_source=HGNC:16063 | ||
|gene_symbol=MLLT10 | |gene_symbol=MLLT10 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:16063 | |hgnc_mgi_id=HGNC:16063 | ||
|nearest_ensembl=ENSG00000078403 | |nearest_ensembl=ENSG00000078403 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001195626 |
|nearest_refseq=NM_004641 | |nearest_refseq=NM_004641 | ||
|nearest_unigene=Hs.30385 | |nearest_unigene=Hs.30385 | ||
| − | |num_trans= | + | |num_trans=32 |
|species=human | |species=human | ||
|start=21534150 | |start=21534150 | ||
|start_of_center_position=21534153 | |start_of_center_position=21534153 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=BC032532 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104210.1 | |tss_id=hg_104210.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:45, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 21534153 |
|---|---|
| End of the center position in the TSS region: | 21534154 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC032532 |
|---|---|
| Distance: | 8 |
| Num_trans: | 32 |
| All_trans: | BC032532:8 NM_004641:15 NM_001195630:15 NM_001195628:15 NM_001195627:15 NR_136736:15 ENST00000377100.8:75 ENST00000377072.8:75 ENST00000307729.12:75 NM_001195626:75 U13948:181 BC065376:186 BC080577:186 ENST00000377091.7:188 ENST00000650772.1:283 ENST00000651298.1:309 AB209755:309 ENST00000471315.5:311 BC052798:317 ENST00000652497.1:319 BC094844:320 BC129946:322 ENST00000495130.5:333 ENST00000621220.4:488 ENST00000377059.7:488 CU687346:488 KJ892460:488 BC156206:488 BC156949:488 AY598745:488 LF383675:488 MA619252:488 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_001195626 |
| Entrez ID: | 8028 |
| Nearest Unigene: | Hs.30385 |
| Nearest Refseq: | NM_004641 |
| Nearest Ensembl: | ENSG00000078403 |
| Gene Name: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Alias: | AF10 |
| Gene Description: | MLLT10 histone lysine methyltransferase DOT1L cofactor |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
