Difference between revisions of "TSS:Hg 104272.1"
From referenceTSS
| Line 4: | Line 4: | ||
|MSRB= | |MSRB= | ||
|PILB= | |PILB= | ||
| − | |all_trans=BC066305:0 AF122004:0 AF151889:-11 EU446941:12 | + | |all_trans=ENST00000376510.8:0 NM_012228:0 BC066305:0 AF122004:0 AF151889:-11 EU446941:12 BC018030:-55 BC117471:-108 BC130380:-108 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-3 |
|end=23095596 | |end=23095596 | ||
|end_of_center_position=23095577 | |end_of_center_position=23095577 | ||
|entrez_id=22921 | |entrez_id=22921 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=CBS-1 | + | |gene_alias=CBS-1{{!}}CBS1{{!}}CGI-131{{!}}MSRB{{!}}PILB |
|gene_description=methionine sulfoxide reductase B2 | |gene_description=methionine sulfoxide reductase B2 | ||
|gene_id=22921 | |gene_id=22921 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_012228 | |nearest_refseq=NM_012228 | ||
|nearest_unigene=Hs.461420 | |nearest_unigene=Hs.461420 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=23095556 | |start=23095556 | ||
|start_of_center_position=23095576 | |start_of_center_position=23095576 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=BC066305 AF122004 | + | |transcript_name=ENST00000376510.8 NM_012228 BC066305 AF122004 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104272.1 | |tss_id=hg_104272.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9Y3D2 |
}} | }} | ||
Revision as of 17:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23095576 |
|---|---|
| End of the center position in the TSS region: | 23095577 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376510.8 NM_012228 BC066305 AF122004 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000376510.8:0 NM_012228:0 BC066305:0 AF122004:0 AF151889:-11 EU446941:12 BC018030:-55 BC117471:-108 BC130380:-108 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_012228 |
| Entrez ID: | 22921 |
| Nearest Unigene: | Hs.461420 |
| Nearest Refseq: | NM_012228 |
| Nearest Ensembl: | ENSG00000148450 |
| Gene Name: | methionine sulfoxide reductase B2 |
| Gene Alias: | CBS-1|CBS1|CGI-131|MSRB|PILB |
| Gene Description: | methionine sulfoxide reductase B2 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
