Difference between revisions of "TSS:Hg 104285.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|OTDC1= | |OTDC1= | ||
| − | |all_trans=NM_001145373: | + | |all_trans=ENST00000376495.5:18 NM_001145373:18 AB188491:212 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
| − | |distance= | + | |distance=18 |
|distance_to_tss=-222 | |distance_to_tss=-222 | ||
|end=23439057 | |end=23439057 | ||
| Line 10: | Line 10: | ||
|entrez_id=220213 | |entrez_id=220213 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=DUBA7 | + | |gene_alias=DUBA7{{!}}OTDC1 |
|gene_description=OTU deubiquitinase 1 | |gene_description=OTU deubiquitinase 1 | ||
|gene_id=220213 | |gene_id=220213 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001145373 | |nearest_refseq=NM_001145373 | ||
|nearest_unigene=Hs.499042 | |nearest_unigene=Hs.499042 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=23439037 | |start=23439037 | ||
|start_of_center_position=23439047 | |start_of_center_position=23439047 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=NM_001145373 | + | |transcript_name=ENST00000376495.5 NM_001145373 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104285.1 | |tss_id=hg_104285.1 | ||
Revision as of 17:47, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23439047 |
|---|---|
| End of the center position in the TSS region: | 23439048 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376495.5 NM_001145373 |
|---|---|
| Distance: | 18 |
| Num_trans: | 3 |
| All_trans: | ENST00000376495.5:18 NM_001145373:18 AB188491:212 |
TATA-Box annotation
| Distance to TSS: | -222 |
|---|---|
| Nearest PromoterID: | NM_001145373 |
| Entrez ID: | 220213 |
| Nearest Unigene: | Hs.499042 |
| Nearest Refseq: | NM_001145373 |
| Nearest Ensembl: | ENSG00000165312 |
| Gene Name: | OTU deubiquitinase 1 |
| Gene Alias: | DUBA7|OTDC1 |
| Gene Description: | OTU deubiquitinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.17 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
