Difference between revisions of "TSS:Hg 104301.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000481700 | + | |all_trans=ENST00000481700.1:-42 ENST00000376462.5:-78 AB033043:-78 NM_001098500:-97 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=-42 | |distance=-42 | ||
| − | |distance_to_tss= | + | |distance_to_tss=104 |
|end=23694838 | |end=23694838 | ||
|end_of_center_position=23694831 | |end_of_center_position=23694831 | ||
|entrez_id=56243 | |entrez_id=56243 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| − | |gene_alias=SKT | + | |gene_alias=ETL4{{!}}SKT |
|gene_description=KIAA1217 | |gene_description=KIAA1217 | ||
|gene_id=56243 | |gene_id=56243 | ||
| Line 15: | Line 15: | ||
|gene_source=HGNC:25428 | |gene_source=HGNC:25428 | ||
|gene_symbol=KIAA1217 | |gene_symbol=KIAA1217 | ||
| − | |gene_synonyms=DKFZP761L0424 SKT | + | |gene_synonyms=DKFZP761L0424 ETL4 SKT |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:25428 | |hgnc_mgi_id=HGNC:25428 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_019590 | |nearest_refseq=NM_019590 | ||
|nearest_unigene=Hs.445885 | |nearest_unigene=Hs.445885 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=23694823 | |start=23694823 | ||
|start_of_center_position=23694830 | |start_of_center_position=23694830 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000481700 | + | |transcript_name=ENST00000481700.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104301.1 | |tss_id=hg_104301.1 | ||
Revision as of 17:47, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23694830 |
|---|---|
| End of the center position in the TSS region: | 23694831 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000481700.1 |
|---|---|
| Distance: | -42 |
| Num_trans: | 4 |
| All_trans: | ENST00000481700.1:-42 ENST00000376462.5:-78 AB033043:-78 NM_001098500:-97 |
TATA-Box annotation
| Distance to TSS: | 104 |
|---|---|
| Nearest PromoterID: | NM_001098500 |
| Entrez ID: | 56243 |
| Nearest Unigene: | Hs.445885 |
| Nearest Refseq: | NM_019590 |
| Nearest Ensembl: | ENSG00000120549 |
| Gene Name: | KIAA1217 |
| Gene Alias: | ETL4|SKT |
| Gene Description: | KIAA1217 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
