Difference between revisions of "TSS:Hg 104366.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000650135.1:-31 ENST00000376351.4:153 NM_020752:153 AK095120:214 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| − | |distance= | + | |distance=-31 |
| − | |distance_to_tss=- | + | |distance_to_tss=-161 |
|end=25174848 | |end=25174848 | ||
|end_of_center_position=25174841 | |end_of_center_position=25174841 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_020752 | |nearest_refseq=NM_020752 | ||
|nearest_unigene=Hs.499108 | |nearest_unigene=Hs.499108 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=25174832 | |start=25174832 | ||
|start_of_center_position=25174840 | |start_of_center_position=25174840 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=18(ACGTCTTAAAGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000650135.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104366.1 | |tss_id=hg_104366.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A3B3IUC3 |
}} | }} | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 25174840 |
|---|---|
| End of the center position in the TSS region: | 25174841 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000650135.1 |
|---|---|
| Distance: | -31 |
| Num_trans: | 4 |
| All_trans: | ENST00000650135.1:-31 ENST00000376351.4:153 NM_020752:153 AK095120:214 |
TATA-Box annotation
| Distance to TSS: | -161 |
|---|---|
| Nearest PromoterID: | NM_020752 |
| Entrez ID: | 57512 |
| Nearest Unigene: | Hs.499108 |
| Nearest Refseq: | NM_020752 |
| Nearest Ensembl: | ENSG00000151025 |
| Gene Name: | G protein-coupled receptor 158 |
| Gene Alias: | - |
| Gene Description: | G protein-coupled receptor 158 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 18(ACGTCTTAAAGG,-,0.00) |
