Difference between revisions of "TSS:Hg 104390.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=NM_000818:-55 BC047899:101 BC039038:123 ENST00000259271.7:282 M74826:282 ENST00000428517.2:350 BC029517:350 M81882:375 ENST00000376261.8:391 NM_001134366:391 BC126327:402 BC126329:402 AB527954:427 HQ258311:427 X69936:442 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:4093 | |hgnc_mgi_id=HGNC:4093 | ||
|nearest_ensembl=ENSG00000136750 | |nearest_ensembl=ENSG00000136750 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_000818 |
|nearest_refseq=NM_000818 | |nearest_refseq=NM_000818 | ||
|nearest_unigene=Hs.231829 | |nearest_unigene=Hs.231829 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=26216361 | |start=26216361 | ||
|start_of_center_position=26216372 | |start_of_center_position=26216372 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=NM_000818 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104390.1 | |tss_id=hg_104390.1 | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 26216372 |
|---|---|
| End of the center position in the TSS region: | 26216373 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_000818 |
|---|---|
| Distance: | -55 |
| Num_trans: | 15 |
| All_trans: | NM_000818:-55 BC047899:101 BC039038:123 ENST00000259271.7:282 M74826:282 ENST00000428517.2:350 BC029517:350 M81882:375 ENST00000376261.8:391 NM_001134366:391 BC126327:402 BC126329:402 AB527954:427 HQ258311:427 X69936:442 |
TATA-Box annotation
| Distance to TSS: | 65 |
|---|---|
| Nearest PromoterID: | NM_000818 |
| Entrez ID: | 2572 |
| Nearest Unigene: | Hs.231829 |
| Nearest Refseq: | NM_000818 |
| Nearest Ensembl: | ENSG00000136750 |
| Gene Name: | glutamate decarboxylase 2 |
| Gene Alias: | GAD65 |
| Gene Description: | glutamate decarboxylase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
