Difference between revisions of "TSS:Hg 232225.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AK123004:-432 ENST00000375946.8:466 LF383678:466 MA619255:466 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=-432 |
| − | |distance_to_tss= | + | |distance_to_tss=-68 |
|end=25934161 | |end=25934161 | ||
|end_of_center_position=27154356 | |end_of_center_position=27154356 | ||
| Line 11: | Line 11: | ||
|gene_alias=DFNB30 | |gene_alias=DFNB30 | ||
|gene_description=myosin IIIA | |gene_description=myosin IIIA | ||
| − | |gene_id= | + | |gene_id=84930 |
| − | |gene_name= | + | |gene_name=microtubule associated serine/threonine kinase like |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:19042 |
| − | |gene_symbol= | + | |gene_symbol=MASTL |
| − | |gene_synonyms= | + | |gene_synonyms=FLJ14813 Gwl THC2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:19042 |
|nearest_ensembl=ENSG00000095777 | |nearest_ensembl=ENSG00000095777 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001368265 |
|nearest_refseq=NM_017433 | |nearest_refseq=NM_017433 | ||
|nearest_unigene=Hs.662630 | |nearest_unigene=Hs.662630 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=25934160 | |start=25934160 | ||
|start_of_center_position=27154355 | |start_of_center_position=27154355 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=AK123004 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_232225.1 | |tss_id=hg_232225.1 | ||
Revision as of 12:19, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 27154355 |
|---|---|
| End of the center position in the TSS region: | 27154356 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK123004 |
|---|---|
| Distance: | -432 |
| Num_trans: | 4 |
| All_trans: | AK123004:-432 ENST00000375946.8:466 LF383678:466 MA619255:466 |
TATA-Box annotation
| Distance to TSS: | -68 |
|---|---|
| Nearest PromoterID: | NM_001368265 |
| Entrez ID: | 53904 |
| Nearest Unigene: | Hs.662630 |
| Nearest Refseq: | NM_017433 |
| Nearest Ensembl: | ENSG00000095777 |
| Gene Name: | microtubule associated serine/threonine kinase like |
| Gene Alias: | DFNB30 |
| Gene Description: | myosin IIIA |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
