Difference between revisions of "TSS:Hg 104496.1"
From referenceTSS
| Line 3: | Line 3: | ||
|PRO1741= | |PRO1741= | ||
|Wwp4= | |Wwp4= | ||
| − | |all_trans=ENST00000345541.6 | + | |all_trans=ENST00000345541.6:-20 AB058747:-20 ENST00000439676.5:-440 AL713727:-440 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-20 | |distance=-20 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2596 |
|end=28535723 | |end=28535723 | ||
|end_of_center_position=28535715 | |end_of_center_position=28535715 | ||
|entrez_id=51322 | |entrez_id=51322 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
| − | |gene_alias=BM-016 | + | |gene_alias=BM-016{{!}}DESSH{{!}}PRO1741{{!}}Wwp4 |
|gene_description=WW domain containing adaptor with coiled-coil | |gene_description=WW domain containing adaptor with coiled-coil | ||
|gene_id=51322 | |gene_id=51322 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:17327 | |hgnc_mgi_id=HGNC:17327 | ||
|nearest_ensembl=ENSG00000095787 | |nearest_ensembl=ENSG00000095787 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_016628 |
|nearest_refseq=NM_016628 | |nearest_refseq=NM_016628 | ||
|nearest_unigene=Hs.743224 | |nearest_unigene=Hs.743224 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=28535705 | |start=28535705 | ||
|start_of_center_position=28535714 | |start_of_center_position=28535714 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000345541.6 | + | |transcript_name=ENST00000345541.6 AB058747 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104496.1 | |tss_id=hg_104496.1 | ||
Revision as of 17:51, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 28535714 |
|---|---|
| End of the center position in the TSS region: | 28535715 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000345541.6 AB058747 |
|---|---|
| Distance: | -20 |
| Num_trans: | 4 |
| All_trans: | ENST00000345541.6:-20 AB058747:-20 ENST00000439676.5:-440 AL713727:-440 |
TATA-Box annotation
| Distance to TSS: | 2596 |
|---|---|
| Nearest PromoterID: | NM_016628 |
| Entrez ID: | 51322 |
| Nearest Unigene: | Hs.743224 |
| Nearest Refseq: | NM_016628 |
| Nearest Ensembl: | ENSG00000095787 |
| Gene Name: | WW domain containing adaptor with coiled-coil |
| Gene Alias: | BM-016|DESSH|PRO1741|Wwp4 |
| Gene Description: | WW domain containing adaptor with coiled-coil |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
