Difference between revisions of "TSS:Hg 104608.1"
From referenceTSS
| Line 8: | Line 8: | ||
|ZFHEP= | |ZFHEP= | ||
|ZFHX1A= | |ZFHX1A= | ||
| − | |all_trans= | + | |all_trans=NM_001128128:0 NM_001323678:0 NM_001323666:0 NM_001323665:0 NM_001323664:0 NM_001323663:0 NM_001323662:0 NM_001174094:0 AK311201:0 AK311187:-28 ENST00000446923.7:-30 ENST00000559496.5:-47 AK311557:-47 AK311116:169 ENST00000557827.5:244 AK308785:244 AK296244:262 ENST00000606671.5:391 NM_001323673:430 NM_001323677:430 NM_001323676:430 NM_001323675:430 NM_001323672:430 NM_001323671:430 ENST00000606161.1:460 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=5 |
|end=31321230 | |end=31321230 | ||
|end_of_center_position=31321206 | |end_of_center_position=31321206 | ||
|entrez_id=6935 | |entrez_id=6935 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=AREB6 | + | |gene_alias=AREB6{{!}}BZP{{!}}DELTAEF1{{!}}FECD6{{!}}NIL2A{{!}}PPCD3{{!}}TCF8{{!}}ZFHEP{{!}}ZFHX1A |
|gene_description=zinc finger E-box binding homeobox 1 | |gene_description=zinc finger E-box binding homeobox 1 | ||
|gene_id=6935 | |gene_id=6935 | ||
| Line 27: | Line 27: | ||
|hgnc_mgi_id=HGNC:11642 | |hgnc_mgi_id=HGNC:11642 | ||
|nearest_ensembl=ENSG00000148516 | |nearest_ensembl=ENSG00000148516 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001323665 |
|nearest_refseq=NM_030751 | |nearest_refseq=NM_030751 | ||
|nearest_unigene=Hs.124503 | |nearest_unigene=Hs.124503 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=31321181 | |start=31321181 | ||
|start_of_center_position=31321205 | |start_of_center_position=31321205 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=AK311201 | + | |transcript_name=NM_001128128 NM_001323678 NM_001323666 NM_001323665 NM_001323664 NM_001323663 NM_001323662 NM_001174094 AK311201 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104608.1 | |tss_id=hg_104608.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P37275 |
}} | }} | ||
Revision as of 17:54, 15 June 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 31321205 |
|---|---|
| End of the center position in the TSS region: | 31321206 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001128128 NM_001323678 NM_001323666 NM_001323665 NM_001323664 NM_001323663 NM_001323662 NM_001174094 AK311201 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | NM_001128128:0 NM_001323678:0 NM_001323666:0 NM_001323665:0 NM_001323664:0 NM_001323663:0 NM_001323662:0 NM_001174094:0 AK311201:0 AK311187:-28 ENST00000446923.7:-30 ENST00000559496.5:-47 AK311557:-47 AK311116:169 ENST00000557827.5:244 AK308785:244 AK296244:262 ENST00000606671.5:391 NM_001323673:430 NM_001323677:430 NM_001323676:430 NM_001323675:430 NM_001323672:430 NM_001323671:430 ENST00000606161.1:460 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001323665 |
| Entrez ID: | 6935 |
| Nearest Unigene: | Hs.124503 |
| Nearest Refseq: | NM_030751 |
| Nearest Ensembl: | ENSG00000148516 |
| Gene Name: | zinc finger E-box binding homeobox 1 |
| Gene Alias: | AREB6|BZP|DELTAEF1|FECD6|NIL2A|PPCD3|TCF8|ZFHEP|ZFHX1A |
| Gene Description: | zinc finger E-box binding homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
