Difference between revisions of "TSS:Hg 104735.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000424751. | + | |all_trans=ENST00000424751.3:0 ENST00000670637.1:0 AK090789:0 ENST00000653292.1:-49 ENST00000429940.7:-60 AK092104:-60 BC007394:-65 NR_026827:-112 AK293138:-112 ENST00000659650.1:-123 ENST00000667964.1:418 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_032770 | |nearest_refseq=NM_032770 | ||
|nearest_unigene=Hs.55977 | |nearest_unigene=Hs.55977 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=42475602 | |start=42475602 | ||
|start_of_center_position=42475626 | |start_of_center_position=42475626 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000424751. | + | |transcript_name=ENST00000424751.3 ENST00000670637.1 AK090789 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104735.1 | |tss_id=hg_104735.1 | ||
Revision as of 17:57, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 42475626 |
|---|---|
| End of the center position in the TSS region: | 42475627 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000424751.3 ENST00000670637.1 AK090789 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000424751.3:0 ENST00000670637.1:0 AK090789:0 ENST00000653292.1:-49 ENST00000429940.7:-60 AK092104:-60 BC007394:-65 NR_026827:-112 AK293138:-112 ENST00000659650.1:-123 ENST00000667964.1:418 |
TATA-Box annotation
| Distance to TSS: | 135 |
|---|---|
| Nearest PromoterID: | NR_026827 |
| Entrez ID: | 84856 |
| Nearest Unigene: | Hs.55977 |
| Nearest Refseq: | NM_032770 |
| Nearest Ensembl: | ENSG00000185904 |
| Gene Name: | long intergenic non-protein coding RNA 839 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 839 |
| Gene Type: | ncRNA |
| CpG%: | 0.045 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
